CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCACCTGGTTCACCCGTGAGGCAGCTTTGGAAATGATAGCATCATTTT
AGATAATGTGAACAAGGGTGGGTTGCATAAAATGAGACTGCAGCTTAGAT
GGACTTTCTTCCACACCCATCTCTTGTGGCTGTGCATAGGCACTGTGTTT
TTAAAAGCCTGTTGACTGATTAGAACCCAGGTTAAAACTTGAAGACAGGC
AATTCAGGTTCTAATTCTGAATTCAAACCGTGCTTTATGTCTTAACATCT
ATAGAATACAGAACAGTCAGTTTACCTTTATGGATCTCGGGTCTCTCACT
TGTAATACCCTTCTCACTCTAACAGTTATGATGATTTGATGAACTTAGGT
ATGGGAAACATTTGTGCCCCCCACACGATAGCTATGATCACTTGAAAGAT
GACCAATATGGAGAGGTGTGGGGAAATCACTACAAGGGGAGTAGAAGTGT
TTCTTTTTGAGATAAAAGTGGAGGGATGTAAATAAATTAATAGTAATAAA
GAAAATACTTGCAAAGGAAAAAAGTTAAGGGTAGAGATGGGAAAGCAAGG
TTACAATCTCTTCAATGTTTAAGGGACATCATGGGACAAACGAAGTAAAT
TTATGCTGTGTTGGCCAGAGTTAATTTGGTCAAATCCCGGGACTACTATT
CAGTAAGACAAGCTTCAGCTCATGCTAAAGAAAGTGCTCTATTN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTGGGGAAAACTTCCTAGAAATTTGACA
TCAGTGATACTGTTCCCTTATCAATTAGTCACAACTGATTTTTTTTTTGT
TAGCCCAAGCTAAGTAGCATCAATTGTCCCAGTGGAACAAAGATTTTTAG
TTCCTCAGATTCATGGTCAAAAATATCTCATGAAAAGCCCCAAAGATTCT
CTTAAAGATCACCAAGCCGGCCTTCAGTTCCCTCTGCATTATCTTCCACG
TTGCCGGAACAGCTCACTGTGCTTGGAGCACTAACTGGATTTTTGAGTCC
AACTCTTCAAAATCCTTCTCTACCTTCCTCCCACAGAAAATTCCAAGGCA
AAAGCACCACATGGTCATACCCACCCCAGCAAAATCCCATTCTCTGGTAT
CACTTTGTGTCCAGTTTGCTTCTCTTTTTGCTGTGATAAAACACTGACTA
AAAACAACTTGGGGAAGAAAGTGTTTATTTGGTGTCCACGTTACGGTCTA
TCATTGATGGAAGCCGAGGGAGGAGCTCACATGCCCACATTTGGCTGGGC
CTTCCTACATCAACCATCAAGAAAATGCCTCACAGACATGACCAGGCCAA
TCTGATGGTGGCAATGCCTCTGTTGAGATTCCCCCTTCCCAGATAAGTCT
ACATTTTTTGTTAAGTTGGCAAACACTAAGCAGCATCTGTGAAAATT

Query= MSMg01no315_g24.b1 MSMg01no315_g24.b1 CHROMAT_FILE:
MSMg01no315_g24.b1 PHD_FILE: MSMg01no315_g24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:54 2005
         (698 letters)



>mm_chr4_111336905_111338002
          Length = 1098

 Score = 1288 bits (666), Expect = 0.0
 Identities = 687/694 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcacctggttcacccgtgaggcagctttggaaatgatagcatcattttagataatg 64
           |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacctggctcaaccgtgaggcagctttggaaatgatagcatcattttagataatg 264

                                                                       
Query: 65  tgaacaagggtgggttgcataaaatgagactgcagcttagatggactttcttccacaccc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgaacaagggtgggttgcataaaatgagactgcagcttagatggactttcttccacaccc 324

                                                                       
Query: 125 atctcttgtggctgtgcataggcactgtgtttttaaaagcctgttgactgattagaaccc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atctcttgtggctgtgcataggcactgtgtttttaaaagcctgttgactgattagaaccc 384

                                                                       
Query: 185 aggttaaaacttgaagacaggcaattcaggttctaattctgaattcaaaccgtgctttat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aggttaaaacttgaagacaggcaattcaggttctaattctgaattcaaaccgtgctttat 444

                                                                       
Query: 245 gtcttaacatctatagaatacagaacagtcagtttacctttatggatctcgggtctctca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtcttaacatctatagaatacagaacagtcagtttacctttatggatctcgggtctctca 504

                                                                       
Query: 305 cttgtaatacccttctcactctaacagttatgatgatttgatgaacttaggtatgggaaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cttgtaatacccttctcactctaacagttatgatgatttgatgaacttaggtatgggaaa 564

                                                                       
Query: 365 catttgtgccccccacacgatagctatgatcacttgaaagatgaccaatatggagaggtg 424
           ||||||||| |   | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 catttgtgctcattaaacgatagctatgatcacttgaaagatgaccaatatggagaggtg 624

                                                                       
Query: 425 tggggaaatcactacaaggggagtagaagtgtttctttttgagataaaagtggagggatg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tggggaaatcactacaaggggagtagaagtgtttctttttgagataaaagtggagggatg 684

                                                                       
Query: 485 taaataaattaatagtaataaagaaaatacttgcaaaggaaaaaagttaagggtagagat 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 taaataaattaatagtaataaagaaaatacttgcaaaggaaaaaagttaagggtagagat 744

                                                                       
Query: 545 gggaaagcaaggttacaatctcttcaatgtttaagggacatcatgggacaaacgaagtaa 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gggaaagcaaggttacaatctcttcaatgtttaagggacatcatgggacaaacgaagtaa 804

                                                                       
Query: 605 atttatgctgtgttggccagagttaatttggtcaaatcccgggactactattcagtaaga 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 atttatgctgtgttggccagagttaatttggtcaaatcccgggactactattcagtaaga 864

                                             
Query: 665 caagcttcagctcatgctaaagaaagtgctctat 698
           ||||||||||||||||||||||||||||||||||
Sbjct: 865 caagcttcagctcatgctaaagaaagtgctctat 898


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 698
Length of database: 1098
Length adjustment: 10
Effective length of query: 688
Effective length of database: 1088
Effective search space:   748544
Effective search space used:   748544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)