Query= MSMg01no318_h24.b1 MSMg01no318_h24.b1 CHROMAT_FILE:
MSMg01no318_h24.b1 PHD_FILE: MSMg01no318_h24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:41 2005
(349 letters)
>mm_chr4_8080422_8081170
Length = 749
Score = 582 bits (301), Expect = e-170
Identities = 304/305 (99%)
Strand = Plus / Minus
Query: 45 aacttagctatatgtcaaaatcaatccgttgaggcacttataataaaacaatattgaaga 104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 aacttagctatatgtcaaaatcaatccgttgaggcacttataataaaacaatattgaaga 690
Query: 105 aaagcacacagatccattcgctgactaaagcaaggacagatttggaacgttaattttata 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 aaagcacacagatccattcgctgactaaagcaaggacagatttggaacgttaattttata 630
Query: 165 ggatgccacagttcctcctcaggactgtgtccaagcgtttgggcctgtcactcgaagtca 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 ggatgccacagttcctcctcaggactgtgtccaagcgtttgggcctgtcactcgaagtca 570
Query: 225 ctactggagtaggtgtggcacttactgttctgtttttctgtctagtcataagcaccaaca 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ctactggagtaggtgtggcacttactgttctgtttttctgtctagtcataagcaccaaca 510
Query: 285 gtagagcttgtggcatcagtgcacaggagatctttttccagtctgtctagctgttctcag 344
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 509 gtagagcttgtggcatcagtgcacaggagatctctttccagtctgtctagctgttctcag 450
Query: 345 atctt 349
|||||
Sbjct: 449 atctt 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space: 251600
Effective search space used: 251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no318_h24.g1 MSMg01no318_h24.g1 CHROMAT_FILE:
MSMg01no318_h24.g1 PHD_FILE: MSMg01no318_h24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:41 2005
(347 letters)
>mm_chr4_7882116_7882864
Length = 749
Score = 640 bits (331), Expect = 0.0
Identities = 344/349 (98%), Gaps = 2/349 (0%)
Strand = Plus / Plus
Query: 1 aatgtgcagctctccttctgcagcctgaacacatttgtcctttctgaataataaaagcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatgtgcagctctccttctgcagcctgaacacatttgtcctttctgaataataaaagcaa 260
Query: 61 gcatgctcaggaagaaagggcagcccattaggggaaaaattgtattttcctaaccaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcatgctcaggaagaaagggcagcccattaggggaaaaattgtattttcctaaccaagaa 320
Query: 121 ctgaatttcactgtggaactgtgaataaatgagcttgcagccgacttgagtgcacaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgaatttcactgtggaactgtgaataaatgagcttgcagccgacttgagtgcacaggaa 380
Query: 181 tttcaatttgaagtttctagaactttccaaggaataagatgaaatttatgattttttt-- 238
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgcaatttgaagtttctagaactttccaaggaataagatgaaatttatgattttttttt 440
Query: 239 aaaccacaggttgaagcttcagtcatgaccctgtgctgattgtcctttggataagatttt 298
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 441 aaaccacaggttgaagcttcaatcatgaccctgtgctgatcgtcctttggataagatttt 500
Query: 299 ctgaagatcactcggcccaactcttcacacattcagtgtatacttctta 347
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgaagatcactcggcccaactcttcacacattcagtgtatacttctta 549
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 749
Length adjustment: 9
Effective length of query: 338
Effective length of database: 740
Effective search space: 250120
Effective search space used: 250120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
