XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTG
TTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCTGAAGTC
CACCTTCTTGAGTTCTTTCTATATGTTGGATATTAGTCCCCTATCTGATT
TAGGATAGGTAAAGATCTTTCCCAATCTGTTGGTGGTCTTTTTGTCCTAT
TGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTCCCAT
TTGTCAATTCTCGATCTTACAGAGCAAGCCATTGCTGTTCTGTTCAGGAA
TCTTTCCCCTGTACCCATATCTTCAAGGCTTTTCCCCACTTTCTCCTCTA
TAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCACTTAGAT
TTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCATTCTTCTACA
TGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATGCTGTCTTTCT
TCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCATAGGTG
TGTGGGTTCATTTCTGGGTCTTTCATTCTATTCCATTGGNCTACTTGTCT
GTCTCTATACCAGTACCATGCAGTTTTTATCACCATTGCCCTGTAGTAAG
CTTTAGGTCAGGCATGGTGATTCCACCAGAGGTTCTTTTTATCTTGAGAA
GAGTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCAGAACTATAAAAAAAACCTATTTCTGGGGTCTG
AAGTCAGTGGGCTTGTGGCCACATGATGGTAGTGACAGGAAACTAACACA
AGTGTCACAACAGATGGTGAGATGTTCCGTTGAGATAATATAAAAATCTT
GTGATTCTGTGATTGGCTGTGTGGTGGGCACAGATAATGTGGTTCAACCA
GAGATCAAGGAAGGCCACTCTGAAGAGGTGATAATGGTCATCCAGAGAGT
CCTGTTCAGCTTCTATTGTCTTGTCTCCTCCAGCAGGGAATGGGGACTTA
TTGGAAGTTGTCAGATATTGTTGATACAAAGAATAGAGACTCACTCGGGC
TATCTCAGAGGTAAGTACTTTGTTGAAATATAAAGAAACCAAGATTGTCA
CTTCAGCCAAGTCCGAAGGAAACAGAGGAGACAAAGCCATCCAACAAGAT
CCCTAGTGAGAAAGGGGTCTGTATCCCAAATCCATTGTCCTTCAGAAGTA
GGAGGGTACCTAGAACCAGACTGGACCTGGCACTTGCAGCTATGGAAATA
GAGTGAGCACTCTTATCCAAAGTCTTTGTTGCCCGGACTTCTATGTTTGT
CGCTGTGTACTTCATTTTATTTTTCTGTCTTGCTCCCAAATACCCATGTA
ATTCTCTAGGTTCTTTCATTAAATCACCAAAGGATAAAGAAATAN

Query= MSMg01no319_c24.g1 MSMg01no319_c24.g1 CHROMAT_FILE:
MSMg01no319_c24.g1 PHD_FILE: MSMg01no319_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:29 2005
         (615 letters)



>mm_chr4_47715677_47716691
          Length = 1015

 Score = 1158 bits (599), Expect = 0.0
 Identities = 611/615 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   catgatggtagtgacaggaaactaacacaagtgtcacaacagatggtgagatgttccgtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgatggtagtgacaggaaactaacacaagtgtcacaacagatggtgagatgttccgtt 260

                                                                       
Query: 61  gagataatataaaaatcttgtgattctgtgattggctgtgtggtgggcacagataatgtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagataatataaaaatcttgtgattctgtgattggctgtgtggtgggcacagataatgtg 320

                                                                       
Query: 121 gttcaaccagagatcaaggaaggccactctgaagaggtgataatggtcatccagagagtc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttcaaccagagatcaaggaaggccactctgaagaggtgataatggtcatccagagagtc 380

                                                                       
Query: 181 ctgttcagcttctattgtcttgtctcctccagcagggaatggggacttattggaagttgt 240
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 ctgttcagcttctattgtcttgtctcctccagcagggaatggggatttattggaagttgt 440

                                                                       
Query: 241 cagatattgttgatacaaagaatagagactcactcgggctatctcagaggtaagtacttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagatattgttgatacaaagaatagagactcactcgggctatctcagaggtaagtacttt 500

                                                                       
Query: 301 gttgaaatataaagaaaccaagattgtcacttcagccaagtccgaaggaaacagaggaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gttgaaatataaagaaaccaagattgtcacttcagccaagtccgaaggaaacagaggaga 560

                                                                       
Query: 361 caaagccatccaacaagatccctagtgagaaaggggtctgtatcccaaatccattgtcct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 561 caaagccatccaacaagatccctagtgagaaaggggtctgtatcccaaagccattgtcct 620

                                                                       
Query: 421 tcagaagtaggagggtacctagaaccagactggacctggcacttgcagctatggaaatag 480
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 621 tcagaagtaggagggtacctagaaccagactggacctggcacttgcagctatggaaatgg 680

                                                                       
Query: 481 agtgagcactcttatccaaagtctttgttgcccggacttctatgtttgtcgctgtgtact 540
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 681 agtgagcactcttatccaaagtctttgttgcccggacttctatgtttgtcactgtgtact 740

                                                                       
Query: 541 tcattttatttttctgtcttgctcccaaatacccatgtaattctctaggttctttcatta 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcattttatttttctgtcttgctcccaaatacccatgtaattctctaggttctttcatta 800

                          
Query: 601 aatcaccaaaggata 615
           |||||||||||||||
Sbjct: 801 aatcaccaaaggata 815


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1015
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1005
Effective search space:   608025
Effective search space used:   608025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)