Query= MSMg01no319_m20.b1 MSMg01no319_m20.b1 CHROMAT_FILE:
MSMg01no319_m20.b1 PHD_FILE: MSMg01no319_m20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:12 2005
(231 letters)
>mm_chr4_54607244_54607874
Length = 631
Score = 431 bits (223), Expect = e-125
Identities = 229/231 (99%)
Strand = Plus / Minus
Query: 1 gcttccccccgagtggcagaactctctgactcactccactgtgcactacatctgtctagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gcttccccccgagtggcagaactctctgactcactccactgtgcactacatctgtctagc 328
Query: 61 attgacatacacgcttcggtctgccatcaacattctcaattcttgcctctctaaccttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 attgacatacacgcttcggtctgccatcaacattctcaattcttgcctctctaaccttct 268
Query: 121 cagtgatgtcttcaatttctcatgaatcgattttttaataaaaactttctttttctttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cagtgatgtcttcaatttctcatgaatcgattttttaataaaaactttctttttctttga 208
Query: 181 aatctatttgtctttttattttattttattttattaaatattttctttatt 231
||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 aatctatgtgcctttttattttattttattttattaaatattttctttatt 157
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 631
Length adjustment: 9
Effective length of query: 222
Effective length of database: 622
Effective search space: 138084
Effective search space used: 138084
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no319_m20.g1 MSMg01no319_m20.g1 CHROMAT_FILE:
MSMg01no319_m20.g1 PHD_FILE: MSMg01no319_m20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:12 2005
(118 letters)
>mm_chr4_54438342_54438860
Length = 519
Score = 223 bits (115), Expect = 4e-63
Identities = 118/119 (99%), Gaps = 1/119 (0%)
Strand = Plus / Plus
Query: 1 actctctggaaaa-agacttgtttgttccatcagagaatacaaactgattactgaggtta 59
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actctctggaaaatagacttgtttgttccatcagagaatacaaactgattactgaggtta 260
Query: 60 gagctatgtcttcctttgatgtgcctcatttaagacaatcttgcctgccttccctggga 118
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagctatgtcttcctttgatgtgcctcatttaagacaatcttgcctgccttccctggga 319
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 118
Length of database: 519
Length adjustment: 8
Effective length of query: 110
Effective length of database: 511
Effective search space: 56210
Effective search space used: 56210
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
