Query= MSMg01no319_p01.b1 MSMg01no319_p01.b1 CHROMAT_FILE:
MSMg01no319_p01.b1 PHD_FILE: MSMg01no319_p01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:21 2005
(372 letters)
>mm_chr4_34597601_34598368
Length = 768
Score = 596 bits (308), Expect = e-175
Identities = 360/400 (90%), Gaps = 36/400 (9%)
Strand = Plus / Plus
Query: 5 gaattcttttttatacctattcttaaaaagactcaaaagaatcatttacattgcttcata 64
||||||||||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct: 205 gaattcttttttaaacttattcttaaaaagactcaaa----tcatttacattgcttcata 260
Query: 65 gtgaaaaaatttacccaaattaagaaggtgattatatgaaattactatatatgagttatt 124
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgaaaaaatttaccaaaattaagaaggtgattatatgaaattactatatatgagttatt 320
Query: 125 gtaagacagttgtgcttgttctgctgatgcacttagaaaaatattattgtaatttggttt 184
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtaagacagtggtgcttgttctgctgatgcacttagaaaaatattattgtaatttggttt 380
Query: 185 gtgtggaagaattagtaacctggaaattttcctcttctgtttaaaattgcatcaagggac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgtggaagaattagtaacctggaaattttcctcttctgtttaaaattgcatcaagggac 440
Query: 245 tagagaaaccgctcagcataatgttaggccaggcactacacacctgtgctatacagacat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagagaaaccgctcagcataatgttaggccaggcactacacacctgtgctatacagacat 500
Query: 305 atatgcaggcaaaacactcagatacata-------------------------------- 332
||||||||||||||||||||||||||||
Sbjct: 501 atatgcaggcaaaacactcagatacatacatacatacatacatacatacatacataaata 560
Query: 333 aataaataaataaatctttttaaaactttaagtaaaattt 372
||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aataaataaataaatctttttaaaactttaagtaaaattt 600
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 768
Length adjustment: 9
Effective length of query: 363
Effective length of database: 759
Effective search space: 275517
Effective search space used: 275517
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no319_p01.g1 MSMg01no319_p01.g1 CHROMAT_FILE:
MSMg01no319_p01.g1 PHD_FILE: MSMg01no319_p01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:21 2005
(343 letters)
>mm_chr4_34754591_34755333
Length = 743
Score = 661 bits (342), Expect = 0.0
Identities = 342/342 (100%)
Strand = Plus / Minus
Query: 1 tgatttgcagatttctgaagataatgttattcagaactttgagaagactcttgaaattat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tgatttgcagatttctgaagataatgttattcagaactttgagaagactcttgaaattat 483
Query: 61 taaaactgctatgaattctcaaatacttgaggtaaaaagtggatctcagggtactggtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 taaaactgctatgaattctcaaatacttgaggtaaaaagtggatctcagggtactggtga 423
Query: 121 gacaacacagaatgctcagataaattacagcatgcaacttccctcagtaaactctatccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gacaacacagaatgctcagataaattacagcatgcaacttccctcagtaaactctatccc 363
Query: 181 agataacaagctgcctgatgcttctcagtgctcctctttcctaactgtaatgccaacaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 agataacaagctgcctgatgcttctcagtgctcctctttcctaactgtaatgccaacaaa 303
Query: 241 gtctgaagcattacataaggaggatcaaatacaggacattttagagggtttgcaaaactt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gtctgaagcattacataaggaggatcaaatacaggacattttagagggtttgcaaaactt 243
Query: 301 aaaactagaaaatgacacctctgctccagcttcccagagtat 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aaaactagaaaatgacacctctgctccagcttcccagagtat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
