Query= MSMg01no325_e08.b1 MSMg01no325_e08.b1 CHROMAT_FILE:
MSMg01no325_e08.b1 PHD_FILE: MSMg01no325_e08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:45 2005
(468 letters)
>mm_chr4_117267591_117268458
Length = 868
Score = 832 bits (430), Expect = 0.0
Identities = 456/465 (98%), Gaps = 2/465 (0%)
Strand = Plus / Minus
Query: 5 gaattccttagacttacctaactcaaaacatgcatgtcagaatacaaagtcagccacata 64
|||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 668 gaattccttagacttagttaactcaagacatgcatgtcagaatacaaagtcagccacata 609
Query: 65 ctaacaagttatgagtgtcaatttaacacacccttgtcagtcgcagcagcagcttttgcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ctaacaagttatgagtgtcaatttaacacacccttgtcagtcgcagcagcagcttttgcc 549
Query: 125 aggcgcacagtacagggtggctcagctgagagccactgacagccgctaccaaggttccag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 aggcgcacagtacagggtggctcagctgagagccactgacagccgctaccaaggttccag 489
Query: 185 aacaccagtaagcagtgcacggtcacgccgcactacttaccgtctctctctggctgcttt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aacaccagtaagcagtgcacggtcacgccgcactacttaccgtctctctctggctgcttt 429
Query: 245 tattttgttacacatttaattaagagctttcccagcagttatgtgcagtcctgcttctta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tattttgttacacatttaattaagagctttcccagcagttatgtgcagtcctgcttctta 369
Query: 305 aaggcagtcggaggccctcctccctaccctgttacctagcagcagctcctctggcaatac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaggcagtcggaggccctcctccctaccctgttacctagcagcagctcctctggcaatac 309
Query: 365 ctttctccacacccacactcaaatcatcgaaaactgtaaagtgttagaattcctttctgt 424
||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ctttctccagagccagactcaaatcatcgaaaactgtaaagtgttagaattcctttctgt 249
Query: 425 ttagntgaatctttatctctgtgacgccc-aaagtattctacttt 468
|||| ||||||||||||||||||| |||| |||||||||||||||
Sbjct: 248 ttagttgaatctttatctctgtga-gccccaaagtattctacttt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space: 392964
Effective search space used: 392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no325_e08.g1 MSMg01no325_e08.g1 CHROMAT_FILE:
MSMg01no325_e08.g1 PHD_FILE: MSMg01no325_e08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:46 2005
(343 letters)
>mm_chr4_117117696_117118441
Length = 746
Score = 630 bits (326), Expect = 0.0
Identities = 340/346 (98%), Gaps = 3/346 (0%)
Strand = Plus / Plus
Query: 1 caggccagcatgggctacagagtgagaccttgtctcaactaacaagcaaatgaaaattgt 60
||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 caggccagcatgggctatagagtgagaccttgtctcaactaacaagcaaataaaaattgt 260
Query: 61 tacggtctgtcccaaggtcgtgagaggagtctgtgcggtaaggggcatgttcatgtaaat 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 tacggtctgtcccaaggtcgtgagaggagtctgtgcagtaaggggcatgttcatgtaaat 320
Query: 121 catgagcacatcagataaagtccacttctagggagataaaagtttctagcttcgttttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catgagcacatcagataaagtccacttctagggagataaaagtttctagcttcgttttct 380
Query: 181 tggtttaggccccatcaatagaccgcatttcctgtttggttttttttttttttt---cta 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 tggtttaggccccatcaatagaccgcatttcctgtttggttttttttttttttttttcta 440
Query: 238 cataagcaaatatttgttgattattgacggggccccgggtgctagggagagcgctaaatg 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cataagcaaatatttgttgattattgacggggccccgggtgctagggagagcgctaaatg 500
Query: 298 atcacaattcttggcctctcgagcttatgcttcagctaaaagatac 343
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atcacaattcttggcctctcgagcttatgcttcagctaaaagatac 546
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 746
Length adjustment: 9
Effective length of query: 334
Effective length of database: 737
Effective search space: 246158
Effective search space used: 246158
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
