TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTCAGCAATACCTAGAAGTAGGGAGAAGAAGGCAATATGGAGAAGG
GAAGAAAGCATTTAAGAAGCCTTCTAGCCTAGTATGACAGTTTCATCTTA
CAGGGTCAGTACTATGTTTTAAATAACTAACATAATTCAGATCTAACAGA
ACCCAAATGTAAGCTCGGATTCCATTTATCTGTATAGAAGTGAGAAAATG
ATATTAAATATGTAAGGAAGAAACTGCATGCCTTATTTGTATATCTCATC
TTGTTAAGTGAGACTCTGAAGTACACCACCAAGTCAGCTGCTCTGGATCT
GTATGTACAATGATCTCAAGATTTGTATGGAGGAGAAAGGCACTCGAGTA
CAGCTATTTGCACACTGCCACTTTTAAATACCTGAAATGGCCAAGGAACT
CACTGACCGTTTGTCGGGATGGGTTGCAATGTGTGTCACGATGACAATGA
CGTGGAGATTTTAAACAGTTCCTTTACCATTCAAATCATTGTTCCAGCCT
TCCTTTCAACCCCAACCCCAACCCTTATCAAATTACATGAAAAGGAAAAA
CAGAAAATCACAAGGGGAAAAAAACATCTGAAAATACAACAAAAATCCTG
CTAGCTCAATCTTGGAAATTTCTTTTCATCCTTATGTGAGCAGATGATTG
TTTTCCGTTCTGCTGCAGTATGCCAAAG

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTCCTCCTTCTGCCTTCACCTCCC
AGGAACAGGGATTGCAAGAGTGCATTCCAGGTGGTCTTTCCTTTTTATTA
AATTTACAGTGCACTATGGCATGCAAGTGGAGGTCAGAGAACAACTTTCA
GGAGTCCATTTTCTCCTTCTACCATATGGTTGCCAGGGATTAAAATTATG
TCATCAGCTGGGTGGTGGTGGCGAGAGCCTTTAATCCCAGTGCTCCTTTA
ATCCCAGCGTTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTTGAGGCCA
GCCTGGTCTACAAAGTGAGTTCCAGGACAGATAGGGCTATACAGAGAAAC
CCTGTCTCGAAAAAAAGAACCCCAAAGAAAAAAGAAAAAAAAGAAAGCAG
GGCTCAGAGGAAAACTTGTAGTTCTGAGTGCCTCCAAAAAGAAACTGGGG
AAAGCATACTCTAGCACCTTGACAACATAACTGAAAACTCTAGAACAAAA
AGAAGCAAATAGACCCAAGAGGAGTAGAAAGCAGGAAATAAACTCAGGGC
TGAAATCAACCAAGTGGAAACAAAAAGAACTATATAAAGAATCAACCAAA
CCAGGAGCTGGTTCTTTGAGAAAATCAACAAGGTAGATAAACCCTCAGCC
AAACTAACCAGAGGGCACAGATCAAATCTGA

Query= MSMg01no325_j10.b1 MSMg01no325_j10.b1 CHROMAT_FILE:
MSMg01no325_j10.b1 PHD_FILE: MSMg01no325_j10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:07 2005
         (684 letters)



>mm_chr4_109014102_109015185
          Length = 1084

 Score = 1276 bits (660), Expect = 0.0
 Identities = 675/680 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcttcagcaatacctagaagtagggagaagaaggcaatatggagaagggaagaaag 64
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 gaattcttcagcaatacatagaagtagggagaagaaggcaatatggagaagggaagaaag 825

                                                                       
Query: 65  catttaagaagccttctagcctagtatgacagtttcatcttacagggtcagtactatgtt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 catttaagaagccttctagcctagtatgacagtttcatcttacagggtcagtactatgtt 765

                                                                       
Query: 125 ttaaataactaacataattcagatctaacagaacccaaatgtaagctcggattccattta 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 ttaaataactaacataattcagatctaacagaacccaaatgtaagctcggattccattta 705

                                                                       
Query: 185 tctgtatagaagtgagaaaatgatattaaatatgtaaggaagaaactgcatgccttattt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 tctgtatagaagtgagaaaatgatattaaatatgtaaggaagaaactgcatgccttattt 645

                                                                       
Query: 245 gtatatctcatcttgttaagtgagactctgaagtacaccaccaagtcagctgctctggat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 gtatatctcatcttgttaagtgagactctgaagtacaccaccaagtcagctgctctggat 585

                                                                       
Query: 305 ctgtatgtacaatgatctcaagatttgtatggaggagaaaggcactcgagtacagctatt 364
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 584 ctgtatgtacaatgatctcaagatttgtatggaggagaaaggcactcaagtacagctatt 525

                                                                       
Query: 365 tgcacactgccacttttaaatacctgaaatggccaaggaactcactgaccgtttgtcggg 424
           |||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 524 tgcacactgttacttttaaatacctgaaatggccaaggaactcaatgaccgtttgtcggg 465

                                                                       
Query: 425 atgggttgcaatgtgtgtcacgatgacaatgacgtggagattttaaacagttcctttacc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 atgggttgcaatgtgtgtcacgatgacaatgacgtggagattttaaacagttcctttacc 405

                                                                       
Query: 485 attcaaatcattgttccagccttcctttcaaccccaaccccaacccttatcaaattacat 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 attcaaatcattgttccagccttcctttcaaccccaaccccaacccttatcaaattacat 345

                                                                       
Query: 545 gaaaaggaaaaacagaaaatcacaaggggaaaaaaacatctgaaaatacaacaaaaatcc 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gaaaaggaaaaacagaaaatcacaaggggaaaaaaacatctgaaaatacaacaaaaatcc 285

                                                                       
Query: 605 tgctagctcaatcttggaaatttcttttcatccttatgtgagcagatgattgttttccgt 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tgctagctcaatcttggaaatttcttttcatccttatgtgagcagatgattgttttccgt 225

                               
Query: 665 tctgctgcagtatgccaaag 684
           ||||||||||||||||||||
Sbjct: 224 tctgctgcagtatgccaaag 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1084
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1074
Effective search space:   723876
Effective search space used:   723876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)