Query= MSMg01no326_a24.b1 MSMg01no326_a24.b1 CHROMAT_FILE:
MSMg01no326_a24.b1 PHD_FILE: MSMg01no326_a24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:42 2005
(585 letters)
>mm_chr4_26900769_26901749
Length = 981
Score = 994 bits (514), Expect = 0.0
Identities = 566/584 (96%), Gaps = 4/584 (0%)
Strand = Plus / Minus
Query: 1 ggccttgaacttagaaatccacctgcctctgcctctgcctctgtgttgggattaaaggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 ggccttgaacttagaaatccacctgcctctgcctctgcctctgtgttgggattaaaggtg 800
Query: 61 tgtgctaccattcccagctataatataattcttactaggcattgtttaacattttatttt 120
||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 799 tgtgctaccattcccggctataatataattcttactaggcattgtttaacatttcatttt 740
Query: 121 ctctttaatctctaattgacatgaaatccttttttaaaaaggagggagtaaattccttaa 180
|||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 739 ctctttaagctctaattgacatgaaatccttttttaaaaaggagcaagtaaattctttaa 680
Query: 181 tatttctaactacaaatatagacgtgtgtgattatgaggtggacttagaggacatacaaa 240
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 679 tatttctaactacaaatatagacatgtgtgattatgaggtggacttagagaacatacaaa 620
Query: 241 atataaacaaagttgataactgcaatatgattttctgcatcttttccatctgcctcttcc 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 atataaccaaagttgataactgcaatatgattttctgcatcttttccatctgcctcttcc 560
Query: 301 tctctactactgcctttccttctactttcaacacttcttttaattgaaaaaaaaaggcat 360
||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 559 tctttactactgcctttccttctactttcaacacttcttttaattg--aaaacaaggcat 502
Query: 361 agttttctgtcttacaactacttgcctccctacctccccattcacccaagctcacatact 420
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 501 agttttctgtcttacaactacttgcct-cctacctccccattcacccaagcccacatact 443
Query: 421 aggctctcacactaacatgtaaaatggctgaagttactaaatgaaatgatcatacgtgaa 480
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 442 aggctctcacactaacatgtaaaatggatgaagttactaaatgaaatgatcatacgtgaa 383
Query: 481 taaataatacataaaaatatgtcaacacataaagacaatatctggacttgctgacaatat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 taaataatacataaaaatatgtcaacacataaagacaatatctggacttgctgacaatat 323
Query: 541 aggattgctagaggaaaactcctgaaaaaaatgcaagcaaagtc 584
|||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 322 aggattgctagaggaaaactcctg-acaaaatgcaagcaaagtc 280
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 981
Length adjustment: 10
Effective length of query: 575
Effective length of database: 971
Effective search space: 558325
Effective search space used: 558325
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_a24.g1 MSMg01no326_a24.g1 CHROMAT_FILE:
MSMg01no326_a24.g1 PHD_FILE: MSMg01no326_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:42 2005
(649 letters)
>mm_chr4_26759746_26760794
Length = 1049
Score = 1226 bits (634), Expect = 0.0
Identities = 643/646 (99%)
Strand = Plus / Plus
Query: 1 cacctttccccaactcttcctctattgtttttctcatccctgcattcccttcctaacttc 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caccttttcccaactcttcctctattgtttttctcatccctgcattcccttcctaacttc 260
Query: 61 ccttttccatgtcctttactgacactgatggtgtactgtgctgggcattgtgcatagtat 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 ccttttccatgtcctttactgacactgatggtgtactgtgctggacattgtgcatagtat 320
Query: 121 gtgttggagtttaattcatatcacattctggttaaatgttattaaaagtaaaaaaggatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgttggagtttaattcatatcacattctggttaaatgttattaaaagtaaaaaaggatg 380
Query: 181 ttattgaaagttataaggatgttgaggttataattatgtgtttgaaataatctcacatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttattgaaagttataaggatgttgaggttataattatgtgtttgaaataatctcacatta 440
Query: 241 ttttctaattcctaaagtgttggcattatgtaagtggtcatgatgtttgtattattttcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttctaattcctaaagtgttggcattatgtaagtggtcatgatgtttgtattattttcg 500
Query: 301 ttttgagtacttcacggtgacattttaaaaaacctgttatttttattatgaatgtacttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttttgagtacttcacggtgacattttaaaaaacctgttatttttattatgaatgtacttt 560
Query: 361 aacagaagcctgtaatattctaaaccatgagttttctacatggcagctaagttttgggag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aacagaagcctgtaatattctaaaccatgagttttctacatggcagctaagttttgggag 620
Query: 421 acgagttcccttagctttctagaacttaagagtatgtttgcatcgcaggaattaaagaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acgagttcccttagctttctagaacttaagagtatgtttgcatcgcaggaattaaagaac 680
Query: 481 tggttcctacttgaaatatttcttttaatatctatttactaaaatatattttgagcaggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tggttcctacttgaaatatttcttttaatatctatttactaaaatatattttgagcaggg 740
Query: 541 atttcaaatcgagaaataaatagagtacattcagtgagttctctttcatactttttttgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atttcaaatcgagaaataaatagagtacattcagtgagttctctttcatactttttttgg 800
Query: 601 ggggggataacttttatccacataaatatatcccaaatatttatga 646
||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 801 ggggggataacttttatcctcataaatatatcccaaatatttatga 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
