CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCAACTGACGAAATTTGAAGGACTGAGAAGCACTCAAAGAAATGTT
CAACATCCGTATTCATCAGGGAAAAGCAAATCAAAACTACCCTGAGATTC
CACTTCAGAACAGTCAGAATGGCTAAGATAAAAAACTCAGGTAACAACAG
ATGCTAGAGAGGATGTAGAGAAAGAGAAACACTCCTCCATTGCTGGTGGG
TACACATGGAGCAACCCTTGACTCCAGCCACATATGTAGCAGAGGATGGC
CTTATTGGACATCCATGGGAGGAGAGGCCCCAGTATAGGAGAATGCCAGG
ATGGGGCAGCAAGAGTGGTTGGGTTGAGGTACACCCTCTTAGAAGCAAGG
GGAGGGGGATCAGATAGGGGGGTTTTGGAGGGGAACCNGANNAGGGGATA
ACATTTGAATAAATAAAGAAAATATCTAATAAAAACAAATTTATAATAAT
TAGATTATAATATTTCTGAAAATTGGTTATTTGTCATTTCAAAATCATTA
CAAGCATCTGCAACTGAGCAGTTTGGTATTCATGAGATCAGCTGAATATC
ATGTATGAATTTCCGACAAGAAATTCAAGTGAGAAAGTGTTTAACTTAAC
GGTAGCAGATTCAGACCCATGGACTTGCCCTTCTTGTTCTTCAAAAGTAT
TGGTCTTTCCTACCCTGACGAGGACCTGATGTCGCTTAGAGGACGTGTTC

ATTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAATAAAACTCTATGTTGATTCCCATC
CTAGGACAAAATATGGAAATGAAAATTATGATGTCTGATGGTCCCTGGTT
TAAAGAATTTTTCACTCATGCAAGCAAAAAATTCCAGTTCACACGTAAAG
AGTAGAATTCAATTTTCATAATAATTTCTGCCTTGTTGAGAAAACTGTAA
AGGCCCTTTGAAGGAAATAAAGCAAAAATTTATTTAAAGTAAGTGCAAAA
TATGTTATTTCAGTGAATGGAAAGTCAAGTGCTAGGGAACACACACATTA
TATTGCTTCACTTTTTGACATGTCAGTAAATGGCAAAGATCAGAAATTTT
CTCTCCAGTAAACAGCTGTACATTCAAAATCCAACAGCAATATATCTTAG
TGTCCAATATTCTACTCAACACTCACTTTACTTTATTTCTTTATTTTCCT
GGATTTTTTTACTTTTATTTATATTATACCTCCTTATTTATATTCAATAC
TAGAGAGAAACAATTTTAAACTAAACTATGTGTTTTAAAGTCTGGATTTA
TTTATTTCTCCTAAATTTTAGTGATTTTTTTCATGCTACTTTACTAAATT
TTTTGCCATTTATGTGTTCATTTATTTAGGCACAAATGGAGTACATTAAC
ATTGTAACATTTGTTTAGTCAGTAAATATATTAGCTTTGAAAAAGATC

Query= MSMg01no326_p02.g1 MSMg01no326_p02.g1 CHROMAT_FILE:
MSMg01no326_p02.g1 PHD_FILE: MSMg01no326_p02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:44 2005
         (674 letters)



>mm_chr4_27721559_27722631
          Length = 1073

 Score = 1168 bits (604), Expect = 0.0
 Identities = 658/676 (97%), Gaps = 5/676 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aataaaactctatgttgattcccatcctaggacaaaatatggaaatgaaaattatgatgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aataaaactctatgttgattcccatcctaggacaaaatatggaaatgaaaattatgatgt 260

                                                                       
Query: 61  ctgatggtccctgg-tttaaagaatttttcactcatgcaagcaaaaaattccagttcaca 119
           |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgatggtccctggttttcaagaatttttcactcatgcaagcaaaaaattccagttcaca 320

                                                                       
Query: 120 cgtaaagagtagaattcaattttcataataatttctgccttgttgagaaaactgtaaagg 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 cgtaaagagtagaattcaattttcataataatttctgccttgttgagaaaaatgtaaagg 380

                                                                       
Query: 180 ccctttgaaggaaataaagcaaaaatttatttaaagtaagtgcaaaatatgttatttcag 239
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 ccctttgaaggaaataaagcaaaaatttatataaagtaagtgcaaaatatgttatttcag 440

                                                                       
Query: 240 tgaatggaaagtcaagtgctagggaacacacacattatattgcttcactttttgacatgt 299
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaatgaaaagtcaagtgctagggaacacacacattatattgcttcactttttgacatgt 500

                                                                       
Query: 300 cagtaaatggcaaagatcagaaattttctctccagtaaacagctgtacattcaaaatcca 359
           |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 501 cagtaaatggcaaagatcagaaatattctatccagtaaacagctgtacattcaaaatcca 560

                                                                       
Query: 360 acagcaatatatcttagtgtccaatattctactcaacactcactttactttatttcttta 419
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acaacaatatatcttagtgtccaatattctactcaacactcactttactttatttcttta 620

                                                                       
Query: 420 ttttcctggatttttttacttttatttatattatacctccttatttatattcaatactag 479
           |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 621 ttttcctggatttttt-acttttatttatattatacctccttatttatattcaatagtag 679

                                                                       
Query: 480 agagaaacaattttaaactaaactatgtgttttaaagtctggatttatttatttctccta 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 agagaaacaattttaaactaaactatgtgttttaaagtctggatttatttatttctccta 739

                                                                       
Query: 540 aattttagtgatttttttcatgctactttactaaattttttgccatttatgtgttcattt 599
           |||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||
Sbjct: 740 aattttagtgatttttttcatgctgctttactat-ttttttgccatttatgtgttcattt 798

                                                                       
Query: 600 atttaggcacaaatggagtacattaacattgtaacattt-gtttagtcagtaaatatatt 658
           ||||||||||||||||| |||||||| ||||| || ||| ||||||||||||||||||||
Sbjct: 799 atttaggcacaaatggactacattaatattgtgac-tttagtttagtcagtaaatatatt 857

                           
Query: 659 agctttgaaaaagatc 674
           ||||||||||||||||
Sbjct: 858 agctttgaaaaagatc 873


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1073
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1063
Effective search space:   705832
Effective search space used:   705832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)