Query= MSMg01no328_c17.b1 MSMg01no328_c17.b1 CHROMAT_FILE:
MSMg01no328_c17.b1 PHD_FILE: MSMg01no328_c17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:14 2005
(349 letters)
>mm_chr4_63837535_63838282
Length = 748
Score = 551 bits (285), Expect = e-161
Identities = 333/351 (94%), Gaps = 5/351 (1%)
Strand = Plus / Plus
Query: 1 cactgacccgatcctcaatggtcatcatgtgtcctaccaggctttcttgctcctagtgac 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cactgaccctatcctcaatggtcatcatgtgtcctaccaggctttcttgctcctagtgac 260
Query: 61 ttcctgactattcctgggggagcaactgcactgagaggcatgttgccaccttctgttctg 120
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 ttcctgactattccttggggagcaactgcactgagaggcatgatgccaccttctgttctg 320
Query: 121 ctccataaagagattctcagctaatcagaga--ctgtaaattcccctaaagccacatcta 178
|||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 ctccataaagagattcccagctaatcagagagactgtaaattcccctaaagccacatcta 380
Query: 179 tcctcttcaatttcttatatttggtttattcattgttcagttgctcagctgcccccattt 238
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcctcttcaacttcttatatttggtttattcattgttcagttgctcagctgcccccattt 440
Query: 239 tcccagtgtatcctgagccttcaaggatcctagtgtccattagaatagagtttctagata 298
||| |||||||||| |||||||||||||||| |||||||||||||||||| | | | |
Sbjct: 441 tccaagtgtatcctaagccttcaaggatcctggtgtccattagaatagagatgc---aca 497
Query: 299 ttggtccagaaactggtctatgagtgaaataataccagggtcctattatga 349
||||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 498 ttggtccagaaactgctctatgagtgaaataataccagggtactattatga 548
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 748
Length adjustment: 9
Effective length of query: 340
Effective length of database: 739
Effective search space: 251260
Effective search space used: 251260
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no328_c17.g1 MSMg01no328_c17.g1 CHROMAT_FILE:
MSMg01no328_c17.g1 PHD_FILE: MSMg01no328_c17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:15 2005
(669 letters)
>mm_chr4_64000950_64002018
Length = 1069
Score = 1226 bits (634), Expect = 0.0
Identities = 660/670 (98%), Gaps = 5/670 (0%)
Strand = Plus / Minus
Query: 1 tcctcccctaaaagctggccttattagggaccattaaggattcttaatgaaagtctcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 tcctcccctaaaagctggccttattagggaccattaaggattcttaatgaaagtctcaca 798
Query: 61 atgggatttccagagcctatttttaaaccgtagattctaaactgtaaatcaaataggaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 atgggatttccagagcctatttttaaaccgtagattctaaactgtaaatcaaataggaaa 738
Query: 121 gttggaatttttgccccagtgacaggagtaagataaagacaggcaaggtggatgggaaac 180
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 737 gttggaatttttgccccagtgacaggagtaagataaacacaggcaaggtggacgggaaac 678
Query: 181 tgtctctgagttaggtctaccctatgagccccttctagatgctctaaaaatctgagagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tgtctctgagttaggtctaccctatgagccccttctagatgctctaaaaatctgagagaa 618
Query: 241 tcctcagagtaatactgcctaaaaaatcagtgtctctatcagttattgctcctgactggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tcctcagagtaatactgcctaaaaaatcagtgtctctatcagttattgctcctgactggt 558
Query: 301 ttctccctgcaaccttgagcttgccattcaaagtcccaaaggactatcccttgagcagtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ttctccctgcaaccttgagcttgccattcaaagtcccaaaggactatcccttgagcagtg 498
Query: 361 aacaaactaaatcaggggctttcctaattaccacagtgatttctggcaataatgagagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aacaaactaaatcaggggctttcctaattaccacagtgatttctggcaataatgagagat 438
Query: 421 ttgctaaaggacatgctcccttttcctgttatcttcggccttctgttttccaaaagtgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ttgctaaaggacatgctcccttttcctgttatcttcggccttctgttttccaaaagtgat 378
Query: 481 ttggtatatgggaactaacagaatgatgcttctctcagtactgtccaccctcatgaactt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ttggtatatgggaactaacagaatgatgcttctctcagtactgtccaccctcatgaactt 318
Query: 541 catttcccctgtctttgcttctgacctgaaaataccttatgacagcttccatgtattggg 600
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 317 catttcccctgtctttgcttctgacctgaaaataccttatgacagctttcatgtattggg 258
Query: 601 ctcctattgtggac-gagcctttactaaaaagttatattcacaacatcacataatcttgc 659
|||||||||||||| | |||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 257 ctcctattgtggactg-gcctttactaaagagttatattcacagcatcacataatctt-- 201
Query: 660 tcttctttta 669
|||||||||
Sbjct: 200 -cttctttta 192
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space: 697881
Effective search space used: 697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
