XXXXXXXXXXXXXXXXXXXXXXXXCTAATCGNGACGGGCGCGGAATCTGA
CCTAACTAAAATTCATTCTCAGCTCTGTAATTATACAGACTGTAGCCTTC
TTATCAACGACTAAAGTTAATATCCAAATACAAGCTAATAAATAACATAT
TTGCCTTTCCAGGTTTGGGTTACCTCACTAAGGGTTTTTATCTCACTCCA
TGGATTTATTTGTAAATTTCATGATTTCTTTTGTTTTGTTTTACCAGCTG
AGTCATATTAAATTGTATATGCATACCATAATTTCTTTCTCCATTTTTCT
GATGATACCTTCTTACTGTTTTCAATGTCTGGCTGCTATGAATATAGTGG
AATGAACTGGATGAGTAAGTGTCTCTGCAGTAAAGCATCTTTTGGATATA
AGCCTAAGAGTGGTATACCTGGATCTGGAGGTAGATCACTTCCCAGCTAC
CTTAGTAACTGACACACTGATTTCCACAGTAGCTGTTCAAGTTGGCACTC
CTTCCAGCAACGAATTAGTGTTCTTCTTACTTAACATTCTTGCAAATATG
AGGTGAGTGTTTTTTTTTTAATTAATCTTGGTCAGTCTTACTGGTATAAG
ATGAAATGACCAAGAAGTTAGTTTGGATCTGCCCTCCCTTTGATGATTAT
TTTATTGACAATTTATTTATAATGGTCTTAGCCATTAAAGATTCCACCTT
TGAAAACTCTATATAAAATT

GACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCATTTTGAATTTGTTTATTTGAATACTTAA
ATTTAAACATATGGTACTCAAAACAATGTCACTGGGATAATCTCTTGTTC
AAGTTGATGTACCATTTAGCAAAGGAATTAAGTCTCTGAAGTAATGGTTT
ACATTTGGGTGTCTGTGAACAGAACTTTCCGTCTCTATTTTTGGTCAGTT
TAACTTGATCTGAGCTTAAGAGAGATTGAAGCTTCATGGAGCAGCTTAAG
GGTGTATAGATGGGATTTTCCAATACATGAGTACAGAAATAACTTTGAGA
CCTGTTCAGACTCAGGAATACCCAATGTAAGAGAGGAAAGCCTTTATGAG
CTGTCCAGGATAGCAGAAATAATCTCCACAAAGCTGAATAAATGAAAATG
TAGAAGACAAATGAAATGCAACTGAGGAAGATAATAATGTATGGAACTCT
AAACAGCCTTCAAATAAAGGGAACAAAAAAATCTAGAAAGAGAATATATT
CCATCAAGAATCCTGTTTATAATTAATGTCCTATATTAAGGTGGTTTATA
AAACTAACACTTTTCACAAGTGGAGGTGATTAACATTGCACTAGAATAGA
GAGAAGGAATATAATTAGGAGAAAAATTGTGAGACTATGCCGGGGTCTAG
TATACACAGAAGTGGATGATCACAGTCAGTT

Query= MSMg01no328_i06.g1 MSMg01no328_i06.g1 CHROMAT_FILE:
MSMg01no328_i06.g1 PHD_FILE: MSMg01no328_i06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:41 2005
         (566 letters)



>mm_chr4_17304922_17305888
          Length = 967

 Score = 1060 bits (548), Expect = 0.0
 Identities = 560/564 (99%), Gaps = 1/564 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cattttgaatttgtttatttgaatacttaaatttaaacatatggtactcaaaacaatgtc 60
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 764 cattttgaatttgtttatttgaatacttaaatttaaacatatagtactcaaaacaatgtc 705

                                                                       
Query: 61  actgggataatctcttgttcaagttgatgtaccatttagcaaaggaattaagtctctgaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 actgggataatctcttgttcaagttgatgtaccatttagcaaaggaattaagtctctgaa 645

                                                                       
Query: 121 gtaatggtttacatttgggtgtctgtgaacagaactttccgtctctatttttggtcagtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 gtaatggtttacatttgggtgtctgtgaacagaactttccgtctctatttttggtcagtt 585

                                                                       
Query: 181 taacttgatctgagcttaagagagattgaagcttcatggagcagcttaagggtgtataga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 taacttgatctgagcttaagagagattgaagcttcatggagcagcttaagggtgtataga 525

                                                                       
Query: 241 tgggattttccaatacatgagtacagaaataactttgagacctgttcagactcaggaata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tgggattttccaatacatgagtacagaaataactttgagacctgttcagactcaggaata 465

                                                                       
Query: 301 cccaatgtaagagaggaaagcctttatgagctgtccaggatagcagaaataatctccaca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 cccaatgtaagagaggaaagcctttatgagctgtccaggatagcagaaataatctccaca 405

                                                                       
Query: 361 aagctgaataaatgaaaatgtagaagacaaatgaaatgcaactgaggaagataataatgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 aagctgaataaatgaaaatgtagaagacaaatgaaatgcaactgaggaagataataatgt 345

                                                                       
Query: 421 atggaactctaaacagccttcaaataaagggaac-aaaaaaatctagaaagagaatatat 479
           |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 344 atggaagtctaaacagccttcaaataaagggaacaaaaaaaatctagaaagagaatatgt 285

                                                                       
Query: 480 tccatcaagaatcctgtttataattaatgtcctatattaaggtggtttataaaactaaca 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tccatcaagaatcctgtttataattaatgtcctatattaaggtggtttataaaactaaca 225

                                   
Query: 540 cttttcacaagtggaggtgattaa 563
           ||||||||||||||||||||||||
Sbjct: 224 cttttcacaagtggaggtgattaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 967
Length adjustment: 10
Effective length of query: 556
Effective length of database: 957
Effective search space:   532092
Effective search space used:   532092
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)