Query= MSMg01no329_i01.b1 MSMg01no329_i01.b1 CHROMAT_FILE:
MSMg01no329_i01.b1 PHD_FILE: MSMg01no329_i01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:58 2005
(511 letters)
>mm_chr4_48092122_48093032
Length = 911
Score = 951 bits (492), Expect = 0.0
Identities = 504/508 (99%)
Strand = Plus / Minus
Query: 4 ggaattcatagacactcctgttaggagccaaaggcacctcatgctgtctttgttgttgtg 63
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 590 ggaattcatagacactcctgttaggagccaaagacacctcatcctgtctttgttgttgtg 531
Query: 64 aacactcacaggatctgtggcttctttagttttccataggagctaagataaaattcagtc 123
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 530 aacactcacaggagctgtggcttctttagttttccataggagctaagataaaattcagcc 471
Query: 124 tctgtgtatactcctgccagcagccagcaaggttttcagttcaccagggagtcaccaact 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tctgtgtatactcctgccagcagccagcaaggttttcagttcaccagggagtcaccaact 411
Query: 184 gtctgggaccttctcagcaatttaaaattccttaaaattctaatcactgacatttagtta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gtctgggaccttctcagcaatttaaaattccttaaaattctaatcactgacatttagtta 351
Query: 244 aagggaacttcccccaccccttgcagattagcaaacagctacagagctgaagtgtggagt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 aagggaacttcccccaccccttgcagattagcaaacagctacagagctgaagtgtggagt 291
Query: 304 ccataatacagagggagagagggagtcagatattttctcatttcacagagatttatacat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ccataatacagagggagagagggagtcagatattttctcatttcacagagatttatacat 231
Query: 364 ggaggattaacatttctctgggcaggaggggtgtagcttagtggtggagtgctcgcttag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 ggaggattaacatttctctgggcaggaggggtgtagcttagtggtggagtgctcgcttag 171
Query: 424 cacacacgccctgggttgaatcctcgtcagcaacagcaaccaaaaaaattgttgtcaccc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 cacacacgccctgggttgaatcctcgtcagcaacagcaaccaaaaaaattgttgtcaccc 111
Query: 484 cctccaatgatttaaccaaacgagcttt 511
||||||||||||||||||||||||||||
Sbjct: 110 cctccaatgatttaaccaaacgagcttt 83
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_i01.g1 MSMg01no329_i01.g1 CHROMAT_FILE:
MSMg01no329_i01.g1 PHD_FILE: MSMg01no329_i01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:59 2005
(623 letters)
>mm_chr4_47936433_47937462
Length = 1030
Score = 1176 bits (608), Expect = 0.0
Identities = 622/630 (98%), Gaps = 7/630 (1%)
Strand = Plus / Plus
Query: 1 tctatgaccaaagtgggatgccattgtcagggttagagaaattggacaagagatacaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctatgaccaaagtgggatgccattgtcagggttagagaaattggacaagagatacaaag 260
Query: 61 tttctgtatgaaagagaactcagctccaggtggcttccccatctaaaacacagtcacaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttctgtatgaaagagaactcagctccaggtggcttccccatctaaaacacagtcacaaa 320
Query: 121 acccaattccacatgtgtgaaaacctttccatgttaaaatataatgggccaatttataac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acccaattccacatgtgtgaaaacctttccatgttaaaatataatgggccaatttataac 380
Query: 181 tagcctttccatgttatgatatatatgcatgattctaaaacaggaaaaggacttgcaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagcctttccatgttatgatatatatgcatgattctaaaacaggaaaaggacttgcaaaa 440
Query: 241 gtcaggctagtttcaaccaagagtgtggaatcataatattagttcaatgttaaggggaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtcaggctagtttcaaccaagagtgtggaatcataatattagttcaatgttaaggggaaa 500
Query: 301 aaa-tgtaattcttctcattgaaaggaagaaaataatgcaattatcttgacgaatgaaaa 359
||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 aaaatgtaattcttctcattgaaaggaagaaaataatgcaattatcttgatgaatgaaaa 560
Query: 360 ttatgaataaattattatctgtttggttttttaaagtagtaatttaagatataatgggct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttatgaataaattattatctgtttggttttttaaagtagtaatttaagatataatgggct 620
Query: 420 taacctgat------ttcaacaagtataatctcagaagtcctcatgacacgcaaacactg 473
||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taacctgatagagatttcaacaagtataatctcagaagtcctcatgacacgcaaacactg 680
Query: 474 aaagtttccctttgccattgatcatgtgacagtcacctattatcaccattctaagagaat 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaagtttccctttgccattgatcatgtgacagtcacctattatcaccattctaagagaat 740
Query: 534 acttaagtagaaaatccacaccagtacaggaaggcggagaaagaagcaaattattggatg 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acttaagtagaaaatccacaccagtacaggaaggcggagaaagaagcaaattattggatg 800
Query: 594 attagacagggaaagctggaactgtcactt 623
||||||||||||||||||||||||||||||
Sbjct: 801 attagacagggaaagctggaactgtcactt 830
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1030
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1020
Effective search space: 625260
Effective search space used: 625260
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
