CCCCACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAGAATCC
GCGGAATTCCAGGGCTCTCCTTACAGCTTTAGTTGCCATGAGGTTATTTT
TTTTCTCTTTTTAAAGTGACACGAATGGCTTTGTCACATTGAATGCTCAC
CAGATAAATGAATGGTTTCAGAATTACTACATTGCCATATGCTCTCTTGC
TTGGCAGTTCTCAACACACCGAAGAAGGCAACATAGAAGCTTCTGTTCTG
CAAAATGTTTCCTCTGATCTCAAAATGTGTGTTCCTGGTGTGGGAGCTAG
TCAATGTGGTCAACAGAAGCCAGCCTCTGAGAGTAAATGACAGTGAGTGT
TACAGTATTCTTCTACAATAGCAACATTTGTTTCAGGAGACAATGCAATT
CAGAAGGGAGAAACATGCTAACCGCAATATTGCTGTTTGGATATGTGTAG
CTCTTAGGAAATGCCCTCCTAATTCTCCACCTTACATGATCTCAGGATCC
AGTGGAAGACTGAGAATTTTTCATCCATTGACAGGAATCCATTAATAAAA
CAACAATCTTTTGTGTGCAGTAATCTTTAATCTTATTTTGTCACACACTC
CTCAGTTGCATCTTCAGTCATTTTACAGTATAATTTATGGCATTGAAACA
ACTCGGGCCCTGGAAAAGGTCAGTCTGTCAAGGTTTAGTTGTCTTTGAAG
AAAAGTAATAGAGCATTATTTATGAACCAAN

NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGG
CAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATG
CAAATCAAAACAACCCTGAGATTCCACCTCAGACCAGTCAGAATGGCTAA
GATCAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAG
GAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGG
AAATCAGTCTGGCGGTTCCTCAGAAAACTGGATATAGTACTACCGGAGGA
TCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTA
AGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCC
AGAAGCTGGAAGGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAA
AATGTGGTGCATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATG
AATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTG
AGTGAGGTAACACATTTACAAAGGAACTCACACAATATGTACTCACTGAT
AAGTGGATATTAGCCCAAAACCTAGGATATCCAATATATAAGATACAATT
TCCTAAACACATGANACTCAAGAAAAATGAA

Query= MSMg01no331_h22.b1 MSMg01no331_h22.b1 CHROMAT_FILE:
MSMg01no331_h22.b1 PHD_FILE: MSMg01no331_h22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:24 2005
         (680 letters)



>mm_chr4_7821549_7822628
          Length = 1080

 Score = 1210 bits (626), Expect = 0.0
 Identities = 662/674 (98%)
 Strand = Plus / Minus

                                                                       
Query: 7   gaattccagggctctccttacagctttagttgccatgaggttattttttttctcttttta 66
           |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 gaattccagggccctgcttacagctttagttgccatgaggttattttttttctcttttta 821

                                                                       
Query: 67  aagtgacacgaatggctttgtcacattgaatgctcaccagataaatgaatggtttcagaa 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 aagtgacacgaatggctttgtcacattgaatgctcaccagataaatgaatggtttcagaa 761

                                                                       
Query: 127 ttactacattgccatatgctctcttgcttggcagttctcaacacaccgaagaaggcaaca 186
           ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 760 ttactacattgccatatgctctcttgcttggcagttctcaacacaccgacgaagacaaca 701

                                                                       
Query: 187 tagaagcttctgttctgcaaaatgtttcctctgatctcaaaatgtgtgttcctggtgtgg 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 700 tagaagcttctgttctgcaaaatgtttcctctgatctcaaaatgtgtgttcgtggtgtgg 641

                                                                       
Query: 247 gagctagtcaatgtggtcaacagaagccagcctctgagagtaaatgacagtgagtgttac 306
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 640 gagctagtcaatgtggtcaacagaagccagcctctgagagtaaatgacagtgggtgttac 581

                                                                       
Query: 307 agtattcttctacaatagcaacatttgtttcaggagacaatgcaattcagaagggagaaa 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 agtattcttctacaatagcaacatttgtttcaggagacaatgcaattcagaagggagaaa 521

                                                                       
Query: 367 catgctaaccgcaatattgctgtttggatatgtgtagctcttaggaaatgccctcctaat 426
            |||||||  |  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 tatgctaattgggatattgctgtttggatatgtgtagctcttaggaaatgccctcctaat 461

                                                                       
Query: 427 tctccaccttacatgatctcaggatccagtggaagactgagaatttttcatccattgaca 486
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 460 tctccaccttacatgatctcaggatccagtggaaggctgagaatttttcatccattgaca 401

                                                                       
Query: 487 ggaatccattaataaaacaacaatcttttgtgtgcagtaatctttaatcttattttgtca 546
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ggaatccattaataaaacaacaatcttttgtgtgcagtaatctttaatcttattttgtca 341

                                                                       
Query: 547 cacactcctcagttgcatcttcagtcattttacagtataatttatggcattgaaacaact 606
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 cacactcctcagttgcatcttcagtcattttacagtataatttatggcattgaaacaact 281

                                                                       
Query: 607 cgggccctggaaaaggtcagtctgtcaaggtttagttgtctttgaagaaaagtaatagag 666
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 cgggccctggaaaaggtcagtctgtcaaggtttagttgtctttgaagaaaagtaatagag 221

                         
Query: 667 cattatttatgaac 680
           ||||||||||||||
Sbjct: 220 cattatttatgaac 207


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1080
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1070
Effective search space:   716900
Effective search space used:   716900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)