Query= MSMg01no332_a01.b1 MSMg01no332_a01.b1 CHROMAT_FILE:
MSMg01no332_a01.b1 PHD_FILE: MSMg01no332_a01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:18:00 2005
(457 letters)
>mm_chr4_122876848_122877704
Length = 857
Score = 777 bits (402), Expect = 0.0
Identities = 439/463 (94%), Gaps = 20/463 (4%)
Strand = Plus / Minus
Query: 1 ttcctgagtcagcacccgtgctgggctttttggtgatgcagtttccagagttgctcagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 ttcctgagtcagcacccgtgctgggctttttggtgatgcagtttccagagttgctcagat 608
Query: 61 tcctgtaaataaccctcacccacacacctgttagtaaccccagtgaactcaccagctcag 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 607 tcctgtaaataaccctcacccacacacatgttagtaaccccagtgaactcaccagctcag 548
Query: 121 taagccgagcgtggatgggattcactttgggtaccaccctttatctggagtgaatagaga 180
|||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 547 taagccgagc--------------ctttgggtaccaccctttatctggagtgaacagaga 502
Query: 181 tatcgccactggaaaagcagtagcgtagatttgggtaaatgagaggggaagttaaaaaat 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatctccactggaaaagcagtagcgtagatttgggtaaatgagaggggaagttaaaaaat 442
Query: 241 aataagattggtaaagtaagttcagatgtttccagatttggatggattggg----gtgtg 296
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 aataagattggtaaagtaagttcagatgtttccagatttggatggattggggtgtgtgtg 382
Query: 297 tgtgtgtat--gagagagagagagagagagagagagagagagagagagagagagagagag 354
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgtgtatgagagagagagagagagagagagagagagagagagagagagagagagagag 322
Query: 355 agatttgcttacntaaaagggaatccatccccagcaatttggatctgtgtggctggcttg 414
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agatttgcttacataaaagggaatccatccccagcaatttggatctgtgtggctggcttg 262
Query: 415 aaaggatgacctgggaaagtcaaatttccctttctttagaatg 457
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaggatgacctgggaaagtcaaatttccctttctttagaatg 219
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 66
Number of extensions: 28
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space: 378609
Effective search space used: 378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no332_a01.g1 MSMg01no332_a01.g1 CHROMAT_FILE:
MSMg01no332_a01.g1 PHD_FILE: MSMg01no332_a01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:18:01 2005
(357 letters)
>mm_chr4_122724300_122725057
Length = 758
Score = 636 bits (329), Expect = 0.0
Identities = 348/355 (98%), Gaps = 4/355 (1%)
Strand = Plus / Plus
Query: 1 gactgaagagagactgctgctgagaaggttgaaaggacagagggagggaggtt-cctgtc 59
|||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 gactaaagagagactgctgctgagaaggttgaaaggacagagggagggaggtttcctgtc 260
Query: 60 ggacctcatggttggctgctggtaggatctctcattaggcctgagaaatgggtgtggcaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggacctcatggttggctgctggtaggatctctcattaggcctgagaaatgggtgtggcaa 320
Query: 120 ctggctagctaacctgatagcatttgttgctaaagtatcctgatgccctgtgctggggac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctggctagctaacctgatagcatttgttgctaaagtatcctgatgccctgtgctggggac 380
Query: 180 tgtttcacccagaaaggcattcagtgagcacccagtggtgaatggcccagtcttgaagac 239
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtttcacccagaaaggcatccagtgagcacccagtggtgaatggcccagtcttgaagac 440
Query: 240 gtcgttttaccttacgatgcttgctcactgtctcctaattttgttagttctttttttt-a 298
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 gtcgttttaccttacgatgcttgctcactgtctcctaattttgttagttcttttttttta 500
Query: 299 aacatttgttcattttatttatatgagtccactgtagctgtcttcagacacacca 353
|| ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 501 aagatttgttcattttatttat--gagtccactgtagctgtcttcagacacacca 553
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 357
Length of database: 758
Length adjustment: 9
Effective length of query: 348
Effective length of database: 749
Effective search space: 260652
Effective search space used: 260652
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
