NNNCCCCCTTTCGNGGNNCACATCGNCCTAAGACTCCTAAGGGAGAGGAT
CCGCGGAATTCCCTACCTGGGGCATCCTCATCTGAAAGACCAAGGACCTC
TCCTCCCATTGATGTCCCTTTAAGCATCTTCTGCTACATATGTGGCTGGA
TCCATGAGTCCATCCACGTGTACTCTTTGGTTGGTGGTTTAGTCCCTGGT
TATTTGTTGGCTCATATTGTTTATCCTATGAGGCTGCAAACTCCTTCAGC
TCCTTGGGTACTTCCTCTAACTCCTCCATTGGGGACACCATGATCAGTCC
AATGGTTGGCTGAGAGCATCCACCTCTGTGTTGTCAGGCACTGGCAGAGC
CTCTCAGGAGACATCTATATCAGGCTCCTGTCAACAAGCACTTTTTGGCA
TCCACAATAGTGTCTAGGTTTGGTGACTGTATATGGGATGGCTCCTCACG
TGGGGCAGTCTCTGGATGGCCTTTCCTTCAGTGTCTGCTCCACACTTTGT
CTCTGTAGCTCCATCCATGGGTATTTTGTTCACCCGTCTAAGAAGGACCA
AAGTATCCACACTTGAGCTTCCTTCTTGAGCTTCATGTGGTCTATGAATT
GTATCTTGGGTATTCTGAGCTCCTGGGCTAATGTGTACTTATTAGTGAGT
GCATACTATGTGTGTTCTTTTGTGATTGGGTTACCTCACTCAGGATGATA
TTCTCTAGTTCCATCCATTTGCCTAAGAATTTCAGGAAGTCATTGTTTTT
AATANCTGAATAGAACACCATTGTGTAAATGTACCACATTTTCTTTATCC
ATTCCTCTGTTGAGGGAAATCAGGGTTCTTTTCACCTTCTGGCTATTATA
AATAAAGCTGCTATGAACATAATGGAGAATGTGGCCCTTATACTTGTTGG
AACATTTTCTAATATATTACCCAGTATATACCCCAACTGCTGGTTCCCCC
TGGCGTAGCATGGTAAAGAAAAAAAAAAACCACTCTTACTCCTGTTTAAA
TTTAAGCCAAGGGAACAGGATTTCCCTTAACCCGAACCCTGAACTAAAAA
AAAAAAAGGGGGAAAACCTGACCCTTCGCCCCGAAAAATCTTGAAAAAGT
CTGTTCTAATAAAAATGAAATGGACCCCAATTAAGTTCTGAGGAAGGATT
TTTTGGAAAAGTCCCAAAAGGAAAATTTTCACTCCGGATGG

NCCGTCTTTTNNNNTCTCATGGAGGCXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCTTTTAATGCATGAAGAGAAAAT
TTTGTGAGTGTTTGGATCATTAATCTGAGGTAACGATGAACAGTTAAAAG
GGAAAAAGAAGTTGGAATTGGTTTTAGAAGTACACAACACAGGTCTGTTA
TTTTTGATCCATCAATACTGGTGGCGACATCATTGCTCTGAGAAGAATCG
TCTGAACACACCAGGGGAAATGTAAAAACTCTTTACTAGCGTTTGCTCTG
TATGAAAGAACATAAAGTGTGGATTAGCCATTCCTGGCTCTTACATCAAA
TCATCACTCTCTACTTAACCGAAACATTTATTTTATATATTTCTGGGAAC
TAGTAGGTCTATCAAGGTACCAGAAACTTCTGGTAAGGGTTTGCTTAGGG
TTCAAAGGTGATTGCTTGCTTTGTCATCATTACAGGGTATAAGCAAGAGT
GGAACAACCATCTCTCTAAGGTCTTCTCAGAGCACTCATATACTGGATGC
AGCCTTTACTCCCAAGACCTAATTACCTCTTAAAGGCCTTGTCCTTTAAC
ATCAACATGTTATGTGTAATATTTTCTAGGCGTGAATTTTTAAAGGAACA
TAAAGGTTTAATTCCCATCGAATGGAGATGATTTTATGTACCATCTTGAC
TAGGCTATATTGTCTAGTTTAATCATCAGGATGTTGCTGTGAATATATTT
TGTAGACTTGATTAGAGTTTGCAGTCCATTACTTTACTTATAAGACATCA
TCACCCTTAGCAGTTTGTCTCATCTAATCAGATGAAGGCTGTAAAGTATC
TCAAGAAAGAGTGTATTCTGTCTCAACACATTAATGGAGAAAGTGTGCCT
GAACTTTGGGACTGCTTGCTTGTTTTACACATATCAATCTCCTTAGCTCT
TCTAACAGGAAAAATACCTTTTTTTAAAAAAAATGCCTGTAAGTATGTAT
GTGCATATGTGTACATAGTGGGGGTATGCATATGGGGACCATGGGGGGCA
TATGGGGATAAATATACCTGGGCCTTCCCTTGGGGAAGGGGGGGGGGAAT
TTGGGGGAAATTGGGCCTATGCGGGGGGGGGGGTGGCGGTAAGTAAATAT
ATATGAGCCCTATATTTATCCTATACACCCCATCAATCTATTCCTTCATA
CAACTTCATTTTCTACTATCTTCTCCTTATCTCCTTTTCC

Query= MSMg01no332_i01.g1 MSMg01no332_i01.g1 CHROMAT_FILE:
MSMg01no332_i01.g1 PHD_FILE: MSMg01no332_i01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:19:01 2005
         (789 letters)



>mm_chr4_63983216_63984404
          Length = 1189

 Score = 1464 bits (757), Expect = 0.0
 Identities = 781/789 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagagaaaattttgtgagtgtttggatcattaatctgaggtaacgatgaacagttaa 60
           |||||||||||||||||||||||||||||| |  |||||||||||| |||||||||||||
Sbjct: 201 atgaagagaaaattttgtgagtgtttggataaagaatctgaggtaatgatgaacagttaa 260

                                                                       
Query: 61  aagggaaaaagaagttggaattggttttagaagtacacaacacaggtctgttatttttga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagggaaaaagaagttggaattggttttagaagtacacaacacaggtctgttatttttga 320

                                                                       
Query: 121 tccatcaatactggtggcgacatcattgctctgagaagaatcgtctgaacacaccagggg 180
           ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 tccatcaatactggtggtgacatcattgctctgagaagaatcatctgaacacaccagggg 380

                                                                       
Query: 181 aaatgtaaaaactctttactagcgtttgctctgtatgaaagaacataaagtgtggattag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaatgtaaaaactctttactagcgtttgctctgtatgaaagaacataaagtgtggattag 440

                                                                       
Query: 241 ccattcctggctcttacatcaaatcatcactctctacttaaccgaaacatttattttata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccattcctggctcttacatcaaatcatcactctctacttaaccgaaacatttattttata 500

                                                                       
Query: 301 tatttctgggaactagtaggtctatcaaggtaccagaaacttctggtaagggtttgctta 360
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagttctgggaactagtaggtctatcaaggtaccagaaacttctggtaagggtttgctta 560

                                                                       
Query: 361 gggttcaaaggtgattgcttgctttgtcatcattacagggtataagcaagagtggaacaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggttcaaaggtgattgcttgctttgtcatcattacagggtataagcaagagtggaacaa 620

                                                                       
Query: 421 ccatctctctaaggtcttctcagagcactcatatactggatgcagcctttactcccaaga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccatctctctaaggtcttctcagagcactcatatactggatgcagcctttactcccaaga 680

                                                                       
Query: 481 cctaattacctcttaaaggccttgtcctttaacatcaacatgttatgtgtaatattttct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cctaattacctcttaaaggccttgtcctttaacatcaacatgttatgtgtaatattttct 740

                                                                       
Query: 541 aggcgtgaatttttaaaggaacataaaggtttaattcccatcgaatggagatgattttat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aggcgtgaatttttaaaggaacataaaggtttaattcccatcgaatggagatgattttat 800

                                                                       
Query: 601 gtaccatcttgactaggctatattgtctagtttaatcatcaggatgttgctgtgaatata 660
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 801 gtaccatcttgactaggctatattgtctagtttaatcatcgggatgttgctgtgaatata 860

                                                                       
Query: 661 ttttgtagacttgattagagtttgcagtccattactttacttataagacatcatcaccct 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 ttttgtagacttgattagagtttgcagtccattactttacttataagacatcatcaccct 920

                                                                       
Query: 721 tagcagtttgtctcatctaatcagatgaaggctgtaaagtatctcaagaaagagtgtatt 780
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 tagcagtttgtctcatctaatcagatgaaggctgtaaagtatctcaagaaagagtgtatt 980

                    
Query: 781 ctgtctcaa 789
           |||||||||
Sbjct: 981 ctgtctcaa 989


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 789
Length of database: 1189
Length adjustment: 10
Effective length of query: 779
Effective length of database: 1179
Effective search space:   918441
Effective search space used:   918441
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)