TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCTTCTTTATCTCCTCAACCATCATCATTAGATTTGCTTTTAAATCC
AGGTCTACCTTTTCAGGTGTGTTAGGGTGTCCTGGACTGGGCGAAGTGGG
CGTTCTGGGTCCTGATGATGGTGAGTGGTCCTGGTTTCTGTTAGTAGGAT
TCTTACGTTTACCTTTTGCCATCTGGCAATCTCTGGAGTTAGTTGTTATA
GTTGTCTTTGTTAAGAGATTGTTCCTCTGTTGATTTTGTTACCCTCAGTC
AGTAGGCGTGGGAGACAAGCTCTCTCCTCTGAGTTTCAGTGGTCAGAGCA
GTCTCTGCAGGCAAGCTCTCCTCTTTCGGGGAAGGTGTACAGTTATCTGG
TGTTTGGACCTCCTCCTGACTGAAGGTGAAGGCCCAAAACAGGATCTTTC
CCAGAAGCTGTGTTGCTTTGGCCAGGAAGGTGGCCGGTTGTCTGGAGCCG
AAGATGGCGCGACCCCAGAAGCTCTGCGACTCTCGCCCGTCCCATAAACG
GCTGGCCTCTGTATTCCACACGGTCACCCGTGCAGTCTGCCCTCCGTGGA
GTCCCGGAGCCAAGAAGGCTCCCGCCGGCGCCTGTGGCACTTACCTCTCC
GGCCGTGCCTACCCTGTGCTCTCACCAGGAAGTGGTCGGCTGTCTGTAGC
TGAAAN

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGTTGCCTGTGCTTCAGTGGCCCC
GAGAGTCCTCCTTGGACTGGCATAAGAACTTGCTGATATTATGCAGGACT
AGATTCAATACAAAGCACATTTTTTTGCCTAGAGTCCTCTGAAACGAATA
AATGGGTTCAGAGAGATGGAAAATAACTGGAAACTGTCTCCTGGCTGGTG
AGGAGAGATAACAGTAGCTCACTGTTTAGGCAGTTCTGTGTCTTCCCAGA
ACAGCACTTGTAAACTGAGAGGTACAAACCTTTCAAGTAATGTCTTGAGT
GAATAAGCAGATGTAGGAGACTTGAAGTGCAGAAGAAAATCAATATAGCA
TTGTGAATGCTACACTGCCTCTAACCGCAGCACTCATGGTTTGGGTTCCA
AACCATAAATAGACACATTCTGTATTAAAAACAATTTCAATTTTTGTTAT
ATTTATTTTCTTTCAAATAGTGCCAATATTGGCCCAGATTTTCACAGAAA
ATTCAGGAAACTACTTAATTCCTTCTCGACTTTGATTGGCTATCACCAGT
CAGCTTTTGCCACCTTCTGTTTTAAGAAATGTAGAAAATTTAATTTCATA
CTATCCAAGCAGAATCTCCTTCCCCATGTAGTATCTGCTGAGTGTACATA
ATCAAAATAACTN

Query= MSMg01no334_f15.g1 MSMg01no334_f15.g1 CHROMAT_FILE:
MSMg01no334_f15.g1 PHD_FILE: MSMg01no334_f15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:45 2005
         (553 letters)



>mm_chr4_35645020_35645972
          Length = 953

 Score = 1046 bits (541), Expect = 0.0
 Identities = 550/553 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agttgcctgtgcttcagtggccccgagagtcctccttggactggcataagaacttgctga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 agttgcctgtgcttcagtggccccgagagtcctccttggactggcataagaacttgctga 694

                                                                       
Query: 61  tattatgcaggactagattcaatacaaagcacatttttttgcctagagtcctctgaaacg 120
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 tattatgcaggactagatttaatacaaagcacatttttttgcctagagtcctctgaaacg 634

                                                                       
Query: 121 aataaatgggttcagagagatggaaaataactggaaactgtctcctggctggtgaggaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 aataaatgggttcagagagatggaaaataactggaaactgtctcctggctggtgaggaga 574

                                                                       
Query: 181 gataacagtagctcactgtttaggcagttctgtgtcttcccagaacagcacttgtaaact 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gataacagtagctcactgtttaggcagttctgtgtcttcccagaacagcacttgtaaact 514

                                                                       
Query: 241 gagaggtacaaacctttcaagtaatgtcttgagtgaataagcagatgtaggagacttgaa 300
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gagaggtacaaacctttaaagtaatgtcttgagtgaataagcagatgtaggagacttgaa 454

                                                                       
Query: 301 gtgcagaagaaaatcaatatagcattgtgaatgctacactgcctctaaccgcagcactca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 gtgcagaagaaaatcaatatagcattgtgaatgctacactgcctctaaccgcagcactca 394

                                                                       
Query: 361 tggtttgggttccaaaccataaatagacacattctgtattaaaaacaatttcaatttttg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tggtttgggttccaaaccataaatagacacattctgtattaaaaacaatttcaatttttg 334

                                                                       
Query: 421 ttatatttattttctttcaaatagtgccaatattggcccagattttcacagaaaattcag 480
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ttatatttattttctttcgaatagtgccaatattggcccagattttcacagaaaattcag 274

                                                                       
Query: 481 gaaactacttaattccttctcgactttgattggctatcaccagtcagcttttgccacctt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gaaactacttaattccttctcgactttgattggctatcaccagtcagcttttgccacctt 214

                        
Query: 541 ctgttttaagaaa 553
           |||||||||||||
Sbjct: 213 ctgttttaagaaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space:   512049
Effective search space used:   512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)