NNNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAAAGAGGAT
CCGCGGAATTCAAGGCTTACACCTAAACATGATAAAAAGCAATCTACAGC
AAACCAGTAGCCAACATCAAAGTAATTGGTGAGAAGCTGGAAGCAATCCC
ACTAAAATCAGGGACTAAATAAGGCTGTCCACTTTCTCCCTACCTAGTCA
ACATTGTACTTGAAGTCCTAGCCAGAGCAATTGGACAAGAAAAGGAGATC
AAGTGGATACAAATTGGAAAAGAAGAGGTCAAAATATCACTTTTTGCAGA
TGATATGATATTATATATAAGTGACTCTCTAAAAATCCCACCAGAGAATG
CCTAAACCTGATAAACAGCTTCCGTGAAGTAGCTGGATATAAAATTAACT
CAAACAAGTCAATGGCCTTTCTGTACACAAAGGATAAACAGGCTGAGAAA
GAAATTAGGAAAACAACACCCTTCTCAATAGTCACAAATAATATAAAATA
TCTTGGTGTGACTCTAACTAAGGAAGTGAAAGATCTGTATGATAAGAACT
TTAAGTGTCTGAAGAAAGAAATTAAAGATCTCAGAAGATGGAAAGATCTC
CCATACTCATGGATTGCCAGGATCAACATTGTAAAAATGGCTATCTTGCC
AAAAGCAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAACACAAT
TCTTCAACGAACTATAAGAGCAATCTGCAAATTCATCT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCAGTATTTGTAAATATGACACACC
CGGACAGAACGAGTAATATCTCAAGTTCAATCAGTAGCCATCTTAAGAGA
CTGACTTTCCTATGCCCAGATGTGAAGGAAACAGAGAAATGGTTAAGAGA
ACCGAATGGTTATGAGAGCCAGATTTAAGATAAAGAACTGTTAATTGTCT
ATGCCCATGAATAGTATCTGAGATAATTAAACTGAAGAGAGCAGAAAGTC
TTTCTGCATATAGTTGTAGAACTTTCAGTTTATGAACACATAGACATGTT
GCTTTGAGCATTAATGAGAGTATATATCATGGAAGAAGGGTATGGTAGAG
GTTTCCCCAGCACCCTCTATGGTTGCAAGTAAATGAAATGGAGGAAGCCA
AGATGAGGGACTAGAGTCCCAATATCCCCTCCAAAGGCAAGGCAACAGTG
ATCACTCCCAGTTCCTGAAGGTTTTACTAGCCATGAATAACACTATATAC
TAAGGAATAATCCTTCAATTCAGGTGTAATGTGGGGAGAATGAAGAGCCA
AGCTCTAGTAAACACTATAGGATGTTGGAGCAGATGACCAGGTTGTTTTA
AGGAAGAAAACATTTAGAAGCAATACCCAGAATCTACTGTGTTGGTTCTG
AGAGAACTGCTCAGCTCCTCACATAGCAATTAGA

Query= MSMg01no339_p07.g1 MSMg01no339_p07.g1 CHROMAT_FILE:
MSMg01no339_p07.g1 PHD_FILE: MSMg01no339_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:54 2005
         (582 letters)



>mm_chr4_68227694_68228675
          Length = 982

 Score = 1064 bits (550), Expect = 0.0
 Identities = 574/582 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagtatttgtaaatatgacacacccggacagaacgagtaatatctcaagttcaatcagta 60
           ||||||||||||||||||||||||| |||||||||||||||| ||||||| || ||||||
Sbjct: 782 cagtatttgtaaatatgacacacccagacagaacgagtaatacctcaagtccagtcagta 723

                                                                       
Query: 61  gccatcttaagagactgactttcctatgcccagatgtgaaggaaacagagaaatggttaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gccatcttaagagactgactttcctatgcccagatgtgaaggaaacagagaaatggttaa 663

                                                                       
Query: 121 gagaaccgaatggttatgagagccagatttaagataaagaactgttaattgtctatgccc 180
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gagaactgaatggttatgagagccagatttaagataaagaactgttaattgtctatgccc 603

                                                                       
Query: 181 atgaatagtatctgagataattaaactgaagagagcagaaagtctttctgcatatagttg 240
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 atgaatagtatctaagataattaaactgaagagagcagaaagtctttctgcatatagttg 543

                                                                       
Query: 241 tagaactttcagtttatgaacacatagacatgttgctttgagcattaatgagagtatata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tagaactttcagtttatgaacacatagacatgttgctttgagcattaatgagagtatata 483

                                                                       
Query: 301 tcatggaagaagggtatggtagaggtttccccagcaccctctatggttgcaagtaaatga 360
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 482 tcatggaagaagggtatggtagaggtttccccagcgccctctatggttgcaagtaaatga 423

                                                                       
Query: 361 aatggaggaagccaagatgagggactagagtcccaatatcccctccaaaggcaaggcaac 420
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 422 aatggaggaagccaagatgagggactagagtcccagtatcccctccaaaggcaaggcaac 363

                                                                       
Query: 421 agtgatcactcccagttcctgaaggttttactagccatgaataacactatatactaagga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 agtgatcactcccagttcctgaaggttttactagccatgaataacactatatactaagga 303

                                                                       
Query: 481 ataatccttcaattcaggtgtaatgtggggagaatgaagagccaagctctagtaaacact 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ataatccttcaattcaggtgtaatgtggggagaatgaagagccaagctctagtaaacact 243

                                                     
Query: 541 ataggatgttggagcagatgaccaggttgttttaaggaagaa 582
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ataggatgttggagcagatgaccaggttgttttaaggaagaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space:   555984
Effective search space used:   555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)