TTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTTAACAAATGGACTTCAAATGATCAAGAAGAACTTAAAGAAATGTTC
TTCAACATCCTTGTCATCAGGTAAGTGCAAATTAAGACAACTCTGACATT
CCACTTTATACAAATCAAAATGGCTAAGATCAAAAAGTTGGATGACAGCA
GACGTTGGCAAGTCTATCGAGACAGTGAGAAACACTCCTCCTTTGCTGGT
GGGATTGCAATCTGGTACAACCACTCTGGAAATCAATATGGTGGTTCCTC
AGAAAATTGGAAATAGTTCTACCTGAAGACCTGGCTATACTGCTCCTGGG
CATATACCCAAAAGATGCTTCACTATATCACAAGGGTGTTCATAGCAGCT
TTGTTCATAATAGCTAGAAACTGGAAGCAACTGGATATCCCTTAACTGAA
GAATGGATACAAAATTTGTGGTTCATTTACATGATAGGATACTATTCAGC
AATTAAAAACAAAGACATCATGAATTTTGCAGACAAATGGATGGAACTAT
AAAATATCATGAGTAAGGTATCCCAGACCCAAAAGAACATGTATGGTATG
TTCTCACTGATAAGTGGATGTTAGCCAAAAAGTACAGAATACCTAAGATA
CATCCCACAGACCCAAAGAAGTGAAACAAGAAGGAAGGCCCAAGTGAGGA
TGCTTGTTCCCACTTAGAAGGGGAAACAAAATAN

NCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAGCTATTTACAAGATAAGCATGAAT
TTCTGGCATCGAGTCTAGGGAGAGCTTTCTCCATGGTTAAATCCATTAAG
TAAATCATGGGGATTCTGTTGAAGAATCACAAATGTTATTTGAAATTGGA
CTACCAGAATTTTTCTTGAGTATACATTTTCTAAGTACTGTGTTTGCTTT
ATACAGCTTTTCCAAGTGCATTTCATAGCAATCTCTTTGGTTTAACCCTA
CCTCCTTTTCTTTCAAATATTCATAAATCCTGTAACAAGACTGAAACAAC
CTGGTCTCATCATTAGCGCCATTAGATGGCGCTAAATCATTGCCATTTCA
GAGTATAGGTTTTTGTTTATTTTGGTGCTTTTGAATGGTTTCAAATTCAT
AGGAATCCTCCCTGCCCCTGCCTTTTGAGAACTGGAATTAAAGGCATGTG
CCATCATACCCGTCCAAAATACGGAGAACGCAGTCTAAAAACCTTGATAT
CAATGGATCTCTTTTCAAGGCACTCATGGGGACCACCAGATTATTCAGAT
GTTCAAGCCTCTTATAGGAAATGGGTTACCATTTGCATATATTATTCATA
AGGGCTCTCATTTATTTTAAATCACCTCTGTATTATTTATAATGCCTAAA
AAATTTAAATTCCACACAAATAGATGTTATACCATCCCAGCTGGGGT

Query= MSMg01no340_i19.g1 MSMg01no340_i19.g1 CHROMAT_FILE:
MSMg01no340_i19.g1 PHD_FILE: MSMg01no340_i19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:35 2005
         (542 letters)



>mm_chr4_85430035_85430976
          Length = 942

 Score =  919 bits (475), Expect = 0.0
 Identities = 513/541 (94%), Gaps = 24/541 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   agctatttacaagataagcatgaatttctggcatcgagtctagggagagctttctccatg 60
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 agctatttacaagataagcatgaatttctggcatccagtctagggagagctttctccatg 260

                                                                       
Query: 61  gttaaatccattaagtaaatcatggggattctgttgaagaatcacaaatgttatttgaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttaaatccattaagtaaatcatggggattctgttgaagaatcacaaatgttatttgaaa 320

                                                                       
Query: 121 ttggactaccagaatttttcttgagtatacattttctaagtactgtgtttgctttataca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttggactaccagaatttttcttgagtatacattttctaagtactgtgtttgctttataca 380

                                                                       
Query: 181 gcttttccaagtgcatttcatagcaatctctttggtttaaccctacctccttttctttca 240
            ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 acttttccaagtgcatttcataacaatctctttggtttaaccctacctccttttctttca 440

                                                                       
Query: 241 aatattcataaatcctgtaacaagactgaaacaacctggtctcatcattagcgccattag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 441 aatattcataaatcctgtaacaagactgaaacaacctggtctcatcattagtgccattag 500

                                                                       
Query: 301 atggcgctaaatcattgccatttcagagtataggtttttgtttattttggtgcttttgaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atggcgctaaatcattgccatttcagagtataggtttttgtttattttggtgcttttgaa 560

                                                                       
Query: 361 tggtttcaaattcataggaatcctccctgcccctgccttttgagaactggaattaaaggc 420
           ||||||||||||||||||||||||||||                        ||||||||
Sbjct: 561 tggtttcaaattcataggaatcctccct------------------------ttaaaggc 596

                                                                       
Query: 421 atgtgccatcatacccgtccaaaatacggagaacgcagtctaaaaaccttgatatcaatg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 atgtgccatcatacccgtccaaaatacggagaacgcagtctaaaaaccttgatatcaatg 656

                                                                       
Query: 481 gatctcttttcaaggcactcatggggaccaccagattattcagatgttcaagcctcttat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 gatctcttttcaaggcactcatggggaccaccagattattcagatgttcaagcctcttat 716

            
Query: 541 a 541
           |
Sbjct: 717 a 717


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 942
Length adjustment: 10
Effective length of query: 532
Effective length of database: 932
Effective search space:   495824
Effective search space used:   495824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)