Query= MSMg01no341_d06.b1 MSMg01no341_d06.b1 CHROMAT_FILE:
MSMg01no341_d06.b1 PHD_FILE: MSMg01no341_d06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:23 2005
(411 letters)
>mm_chr4_96560962_96561768
Length = 807
Score = 760 bits (393), Expect = 0.0
Identities = 402/407 (98%), Gaps = 4/407 (0%)
Strand = Plus / Minus
Query: 5 gaattcaatagttaaatgtaatcccattgctttactccacctcctccaatccagctttac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 gaattcaatagttaaatgtaatcccattgctttactccacctcctccaatccagctttac 548
Query: 65 ctttgcaatgtgagagaaattagctcaatgtggtttgttacatatcttcttcagtgtggc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ctttgcaatgtgagagaaattagctcaatgtggtttgttacatatcttcttcagtgtggc 488
Query: 125 tggtaacagtgtaatgatggatggcttgattatttagcaaaagtctatttctcacacgag 184
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tggtaacagtgtaatgatgaatggcttgattatttagcaaaagtctatttctcacacgag 428
Query: 185 atggcagatttccatggaaggccacttctcttcacattctctaggagttaacatggaagc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 atggcagatttccatggaaggccacttctcttcacattctctaggagttaacatggaagc 368
Query: 245 tagcacctggaagatacttcaagcctttgtgaaataaatcagtgaggataccatgaaata 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tagcacctggaagatacttcaagcctttgtgaaataaatcagtgaggataccatgaaata 308
Query: 305 attcatcaccaaaaattaattgtcattttatgcaatttctctcaatcatccatgcaacat 364
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 attcatcaccaaa----aattgtcattttatgcaatttctctcaatcatccatgcaacat 252
Query: 365 tttcaaatgtttaatatatctcaaatgatgggctttgtgataaacaa 411
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tttcaaatgtttaatatatctcaaatgatgggctttgtgataaacaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 807
Length adjustment: 9
Effective length of query: 402
Effective length of database: 798
Effective search space: 320796
Effective search space used: 320796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_d06.g1 MSMg01no341_d06.g1 CHROMAT_FILE:
MSMg01no341_d06.g1 PHD_FILE: MSMg01no341_d06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:23 2005
(410 letters)
>mm_chr4_96412179_96412988
Length = 810
Score = 793 bits (410), Expect = 0.0
Identities = 410/410 (100%)
Strand = Plus / Plus
Query: 1 acattaaatgtgaattctgacttccatttccctggccaaaaacagggataataatttcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acattaaatgtgaattctgacttccatttccctggccaaaaacagggataataatttcca 260
Query: 61 tccaatacaacctgagctcattttacataagggtgattcagagtggagattagaaatcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccaatacaacctgagctcattttacataagggtgattcagagtggagattagaaatcgt 320
Query: 121 aatcaagtcttcctcacaatcgccttatcctggcagtcattcactaatgtctctgctaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatcaagtcttcctcacaatcgccttatcctggcagtcattcactaatgtctctgctaat 380
Query: 181 tgttaggaaaatggaaaaataaaaaagaaatctcagagtttaaaaaatgtattaaaagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgttaggaaaatggaaaaataaaaaagaaatctcagagtttaaaaaatgtattaaaagaa 440
Query: 241 aaaaacaattttgttgcagggttggcaaaattacccctcttgtcagctcttggaacatgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaaacaattttgttgcagggttggcaaaattacccctcttgtcagctcttggaacatgc 500
Query: 301 tagtttaagaagggaacacaactcattttatttggctagatggggctaatcccacatcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagtttaagaagggaacacaactcattttatttggctagatggggctaatcccacatcac 560
Query: 361 cacaatccctcctgatgttttattgattctaaaggacatttaatcaggag 410
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cacaatccctcctgatgttttattgattctaaaggacatttaatcaggag 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
