XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAGTAAT
TCTCCTATATCCCTATGACCCAACGAAGGGATTTCTTAGAATCATAGATA
TTATTAGTTTTATTCTCAGATAACCTTCCAATTCTGAAAACACATGATCA
TTCAAAATCAAATATATTAAAGAATATACCTGTACTATATCAACAAAGGC
TAACAGAGTTCTTCCTTTCTATTCAGTTCTAGAAACTTAATTCATGCCAC
ACTGAAATGAGCAAGAATGGTATACTGAACTAATGAGACATTTCTGCCCC
CTACTAAGTACTGTGATGCTCTGCAAATCTAAAACAAGTGCCCGAGCCTC
TGTGGGCAGCAAAATCGTGACAGTGGCAGTGTCTGAACGCCCATTATCTA
TGGACATAAATCAGCCTTCATAATGAACTTACAAGTCAAACAAACTGCAA
ATGTTCAAGTCTTTAGGTTTTAGAGTGATTGCATTTTCATTTGATTTCAA
CTTTATTGTGCTTCCTGTATGCTAAGTGCTTGTCCTAAAATAAGTATGCA
TCATGAATAGTTATGGCCTCTTACCCAGGGCCTGCTCAATATAAGCACAC
TGGGAAACACAATGCTTGTGCATCTTTTATGTTTTAACAAGAAAATATAG
ACATTACCCCTCACCTAACATGTGATAATGATTTGTCCAAATCCAATACC
TCAACAT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTG
AAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAAC
GCTAAGATTCCACCTCACAACAGTCAGAATGTCTAAGATCAAAAATTCAG
GTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCAT
TGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCCGTCTGGCG
GTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTC
TCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGC
TCCACTATGTTCATAGCAGCATTATTTATAATAGCCAGAAGCTGGAAAGA
ACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCT
ACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTC
CTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGGAACACA
TTCACAAAGGAACTCCCACCATATGTACTCCCTGAGAAGGGGATATTTAG
CCCCAACCTAGGATACCTCTGATATAATATACACATTTCCTAAACACATG
GATCCTTATAAATAACG

Query= MSMg01no342_e04.b1 MSMg01no342_e04.b1 CHROMAT_FILE:
MSMg01no342_e04.b1 PHD_FILE: MSMg01no342_e04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:44 2005
         (529 letters)



>mm_chr4_75794398_75795326
          Length = 929

 Score =  948 bits (490), Expect = 0.0
 Identities = 517/526 (98%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcagtaattctcctatatccctatgacccaacgaagggatttcttagaatcatag 63
           |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagtaagtcagctatatccctatgacccaacgaagggatttcttagaatcatag 263

                                                                       
Query: 64  atattattagttttattctcagataaccttccaattctgaaaacacatgatcattcaaaa 123
           ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 264 atattattagttttattctcagataactttccaattctgaaaacacatgattattcaaaa 323

                                                                       
Query: 124 tcaaatatattaaagaatatacctgtactatatcaacaaaggctaacagagttcttcctt 183
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 324 tcaaatatattaaagaatatacttgtactatatcaacaaaggctaacagagttcttcctt 383

                                                                       
Query: 184 tctattcagttctagaaacttaattcatgccacactgaaatgagcaagaatggtatactg 243
           |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tctattcagtcctagaaactcaattcatgccacactgaaatgagcaagaatggtatactg 443

                                                                       
Query: 244 aactaatgagacatttctgccccctactaagtactgtgatgctctgcaaatctaaaacaa 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aactaatgagacatttctgccccctactaagtactgtgatgctctgcaaatctaaaacaa 503

                                                                       
Query: 304 gtgcccgagcctctgtgggcagcaaaatcgtgacagtggcagtgtctgaacgcccattat 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtgcccgagcctctgtgggcagcaaaatcgtgacagtggcagtgtctgaacgcccattat 563

                                                                       
Query: 364 ctatggacataaatcagccttcataatgaacttacaagtcaaacaaactgcaaatgttca 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctatggacataaatcagccttcataatgaacttacaagtcaaacaaactgcaaatgttca 623

                                                                       
Query: 424 agtctttaggttttagagtgattgcattttcatttgatttcaactttattgtgcttcctg 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agtctttaggttttagagtgattgcattttcatttgatttcaactttattgtgcttcctg 683

                                                         
Query: 484 tatgctaagtgcttgtcctaaaataagtatgcatcatgaatagtta 529
           |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 684 tatgctaagtgcttgtcctaaaataaatatgcatcatgaatagtta 729


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space:   476961
Effective search space used:   476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)