MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-342E12
Chromosome	4 (Build37)
Map Location	34,895,969 - 34,896,353
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100041919, LOC100041924, Cnr1, Spaca1, LOC100039220, LOC665361, LOC665367, 2700059D21Rik, Orc3l, Rars2, Slc35a1, 1700003M02Rik, Gm136, 1810030N24Rik, Zfp292, Cga
Downstream gene	Mobkl2b, Ifnk, 3110043O21Rik, LOC620559, LOC621227, Lingo2
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100041919 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041919
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC100041924 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041924
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Cnr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12801 MGI:104615
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spaca1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67652 MGI:1914902
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039220 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039220
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 144 ESTs, 1 Protein

name	LOC665361 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665361
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC665367 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665367
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 818 ESTs, 10 Proteins

name	2700059D21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433693 MGI:1889364
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Orc3l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50793 MGI:1354944
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rars2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109093 MGI:1923596
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc35a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24060 MGI:1345622
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700003M02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69329 MGI:1916579
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm136 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214568 MGI:2684982
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1810030N24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66291 MGI:1913541
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp292 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30046 MGI:1353423
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 172 ESTs, 6 Proteins

name	Cga (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12640 MGI:88390
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mobkl2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214944 MGI:2664539
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ifnk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:387510 MGI:2683287
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	3110043O21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73205 MGI:1920455
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC620559 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620559
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 887 ESTs, 3 Proteins pseudo : _no_value

name	LOC621227 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:621227
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Lingo2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242384 MGI:2442298
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041919 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252281 GeneID:100041919
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC100041919 transcript_id : XM_001477525.1

name	LOC100041924 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252283 GeneID:100041924
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041924 transcript_id : XM_001477543.1

name	Cnr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76096369 GeneID:12801 MGI:104615
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cannabinoid receptor 1 (brain) transcript_id : NM_007726.3

name	Spaca1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142359979 GeneID:67652 MGI:1914902
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sperm acrosome associated 1 transcript_id : NM_026293.2

name	LOC100039220 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252245 GeneID:100039220
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 144 ESTs, 1 Protein product : similar to RNA polymerase 1-3 transcript_id : XM_001472479.1

name	LOC665367 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252285 GeneID:665367
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 818 ESTs, 10 Proteins product : similar to coiled-coil-helix-coiled-coil-helix domain containing 2 transcript_id : XM_976411.2

name	2700059D21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87080824 GeneID:433693 MGI:1889364
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2700059D21 gene transcript_id : NM_001007589.3

name	Orc3l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803338 GeneID:50793 MGI:1354944
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : origin recognition complex, subunit 3-like (S. cerevisiae) transcript_id : NM_015824.3

name	Rars2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31340970 GeneID:109093 MGI:1923596
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arginyl-tRNA synthetase 2, mitochondrial (putative) transcript_id : NM_181406.2

name	Slc35a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560518 GeneID:24060 MGI:1345622
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 35 (CMP-sialic acid transporter), member 1 transcript_id : NM_011895.2

name	1700003M02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:66793399 GeneID:69329 MGI:1916579
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700003M02 gene transcript_id : NM_027041.2

name	Gm136 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388743 GeneID:214568 MGI:2684982
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 136, (NCBI) transcript_id : NM_001033255.2

name	1810030N24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348730 GeneID:66291 MGI:1913541
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1810030N24 gene transcript_id : NM_025471.2

name	Zfp292 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94371663 GeneID:30046 MGI:1353423
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 172 ESTs, 6 Proteins product : zinc finger protein 292, transcript variant 2 transcript_id : XM_620009.3

name	Cga (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129833 GeneID:12640 MGI:88390
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycoprotein hormones, alpha subunit transcript_id : NM_009889.2

name	Mobkl2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130339 GeneID:214944 MGI:2664539
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MOB1, Mps One Binder kinase activator-like 2B (yeast) transcript_id : NM_178061.4

name	Ifnk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71534273 GeneID:387510 MGI:2683287
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interferon kappa precursor transcript_id : NM_199157.2

name	3110043O21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486790 GeneID:73205 MGI:1920455
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3110043O21 gene transcript_id : NM_001081343.1

name	Lingo2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803519 GeneID:242384 MGI:2442298
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine rich repeat and Ig domain containing 2 transcript_id : NM_175516.3

name	LOC100041919 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252282 GeneID:100041919
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477575.1

name	LOC100041924 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252284 GeneID:100041924
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477593.1

name	Cnr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6724315 CCDS:CCDS18025.1 GeneID:12801 MGI:104615
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : striatal cannabinoid receptor type 1 protein product : cannabinoid receptor 1 (brain) protein_id : NP_031752.1

name	Spaca1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312846 CCDS:CCDS18026.1 GeneID:67652 MGI:1914902
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : sperm acrosome associated 1 protein_id : NP_080569.1

name	LOC100039220 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252246 GeneID:100039220
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472529.1

name	LOC665367 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94371662 GeneID:665367
definition	codon_start : 1 product : hypothetical protein protein_id : XP_981505.1

name	2700059D21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86604728 CCDS:CCDS18027.1 GeneID:433693 MGI:1889364
definition	codon_start : 1 product : hypothetical protein LOC433693 protein_id : NP_001007590.2

name	Orc3l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27902275 CCDS:CCDS18028.1 GeneID:50793 MGI:1354944
definition	GO_component : GO:0005664 - nuclear origin of replication recognition complex [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0006260 - DNA replication [Evidence TAS] codon_start : 1 exception : mismatches in translation note : origin of replication 3 homolog product : origin recognition complex, subunit 3-like protein_id : NP_056639.2

name	Rars2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31088898 CCDS:CCDS18029.1 GeneID:109093 MGI:1923596
definition	codon_start : 1 exception : mismatches in translation product : arginyl-tRNA synthetase-like protein_id : NP_852071.1

name	Slc35a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755558 CCDS:CCDS18030.1 GeneID:24060 MGI:1345622
definition	GO_component : GO:0000139 - Golgi membrane [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005338 - nucleotide-sugar transporter activity [Evidence IEA]; GO:0005351 - sugar porter activity [Evidence IEA] GO_process : GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0015780 - nucleotide-sugar transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : solute carrier family 35 (CMP-sialic acid transporter), member 1 protein_id : NP_036025.1

name	1700003M02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66793400 CCDS:CCDS18031.1 GeneID:69329 MGI:1916579
definition	codon_start : 1 product : hypothetical protein LOC69329 protein_id : NP_081317.2

name	Gm136 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701762 CCDS:CCDS18032.1 GeneID:214568 MGI:2684982
definition	codon_start : 1 product : hypothetical protein LOC214568 protein_id : NP_001028427.1

name	1810030N24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384890 GeneID:66291 MGI:1913541
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : hypothetical protein LOC66291 protein_id : NP_079747.1

name	Zfp292 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82892898 GeneID:30046 MGI:1353423
definition	codon_start : 1 product : zinc finger protein 292 isoform 2 protein_id : XP_620009.2

name	Cga (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753414 CCDS:CCDS18035.1 GeneID:12640 MGI:88390
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005179 - hormone activity [Evidence IEA] codon_start : 1 note : glycoprotein hormones alpha subunit product : glycoprotein hormones, alpha subunit protein_id : NP_034019.1

name	Mobkl2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30017359 CCDS:CCDS18036.1 GeneID:214944 MGI:2664539
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : MOB1 (Mps One Binder) kinase activator-like 2B product : Mob3b protein protein_id : NP_835162.1

name	Ifnk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40255305 CCDS:CCDS18037.1 GeneID:387510 MGI:2683287
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0005615 - extracellular space [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0005126 - hematopoietin/interferon-class (D200-domain) cytokine receptor binding [Evidence IEA] GO_process : GO:0006952 - defense response [Evidence IEA]; GO:0009615 - response to virus [Evidence IEA] codon_start : 1 product : interferon kappa precursor protein_id : NP_954608.1

name	3110043O21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486791 GeneID:73205 MGI:1920455
definition	codon_start : 1 product : hypothetical protein LOC73205 protein_id : NP_001074812.1

name	Lingo2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425278 CCDS:CCDS18040.1 GeneID:242384 MGI:2442298
definition	GO_function : GO:0004180 - carboxypeptidase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : leucine rich repeat neuronal 6C protein_id : NP_780725.1

name	LOC665361 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665361
definition	number : 3 pseudo : _no_value

name	LOC665361 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665361
definition	number : 2 pseudo : _no_value

name	LOC665361 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665361
definition	number : 1 pseudo : _no_value

name	LOC621227 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:621227
definition	number : 1 pseudo : _no_value

name	LOC620559 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252286 GeneID:620559
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 887 ESTs, 3 Proteins product : similar to ribosomal protein S2 pseudo : _no_value transcript_id : XR_033376.1

clone name	MSMg01-405G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518E10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-145G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381O14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-526L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027B10
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-342E12.T7 (MSMg01no342_e12.b1)	MSMg01-342E12.TJ (MSMg01no342_e12.g1)
ACC	AG455871	AG455872
length	752	758
length of high quality (start - end)	413 (56 - 468)	438 (63 - 500)
definition	CHROMAT_FILE: MSMg01no342_e12.b1 PHD_FILE: MSMg01no342_e12.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:31:45 2005	CHROMAT_FILE: MSMg01no342_e12.g1 PHD_FILE: MSMg01no342_e12.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:31:45 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCCGCGGAATTCTCATTGT ACCAGGATTCTATCTTGTCCCCCAAATGACCCCTAATTCCAGTCACCTCT CCAAGTACTCCACCCAACCTAATCTATCCTGATACTATCCCCACCTGCCT CCAGTCTACCTATGAAATCTATTCAATTTCCTCTCCCCTTCTCAGGGAGA TCCATTCACACACACACACACACACACACACACACACACACACACACACA CACACACACACACTTTTTAAGCAACTTTCTTTGTTTTCTCCACTGTCCTA GTTACTTTTCTATTGCTGTGAAGGGACACCATATCAAAGACAACATATAG AAGAAAACATTTAATTTGGGGCTTGCTTACAGTTTCAGAGGGGAAGTAAG TCCATGGCCATCATGGCAGAGATCATAACAGCAGGGGTCATGATACTGGA GTAGTAGCTGAAAGCTTACATGTTAAGACAGCAGCAGCAGCAGCTTTNGA GAGAGAGAGAGATAGAGAGAGATAGAGACCGATAGAGAGAGAATCTTCCT AACCGAAACCGGCACCGATATTGTTATATACCCACTCCCTATAGCCGGAT CATATAATTAAATCTGCATAGTATCCCCTTCCTTTTTTCTTTTTTCGACC TGTGTGTGGCTTAATCGTTGTCCTTACCCCTTCCCCTATTGTCCATCCTT TCTCCCCCCCATAACATTCCCCTCCTCGTTTTTTTCCCCACCAAAATTTC TN	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXAGAGGTCATGAATAAATGCTACATAAAACCATCTTCTA GTCTGTCGTCTTTGCCTGCCTCATCTGTCTGTCACCTTGCCCTGTTCCTA CGAGGGGTCAAAGGAGGAAAACTGTGGATTTTACAAAAGCTAATCCAAAT TTTTTTTTTGAAAGCACACATGAACACACCCACGTTTTAACTGGTCATTC AGGTTAGTTCCAGCTCAGGGGTCTCTGGGCCCTCTTTCTGAAGTACATAG TGTCTTTAGTAATCAGGACCTACATTCACACTCTGGGGCCAGGCATGGTG GGGTAGGGGGTGCAACCAAGTGCAATAGTAATAGACTGTTATTTTGGGAG TCTCTTGGACAGCCCTGACTAACAATTCAAAAGAAGGCTTCCCATGGCTG GTACCCGGATTCGTTAGGTTGTCTTTGGCTCTTGAAGGGAACACCGTCAG CCTCAATAAGAACGCTTCTTTAAACTATACAACTGCATTTATACCCAGAA CTCTATAGATCATCTAGGGATATAACAATCCATGGTTTCCAAATCTATGA AAAAAATTATTTTCCCCTACCTCCTAATCTATTTACTATAAACCCACTTT TTTTTTTTTTTCACCTAATATAATGGGGTCCCTGGGGGGTTTTTACAAAA AAATTTGGTATTTATTTTCCTCTCACGCCCCCCCCCCAATATTATATATC TACCCCCN
quality values	Open. Hide. 15 19 15 15 21 12 9 10 16 13 22 29 39 22 16 15 14 13 7 10 8 11 8 8 8 8 11 11 15 15 12 12 12 15 16 33 36 33 33 33 33 33 33 33 30 21 19 9 9 9 9 9 12 11 11 13 21 26 32 37 43 43 48 48 43 57 57 57 57 59 53 57 57 57 50 50 57 57 57 57 59 59 59 68 68 68 68 51 51 51 51 50 51 68 68 50 50 68 68 48 48 41 41 41 41 59 57 57 57 57 57 57 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 47 42 42 37 37 37 42 42 57 57 57 59 48 48 48 48 47 47 48 57 57 57 68 68 68 59 57 57 57 57 57 57 59 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 57 57 57 48 48 48 59 59 48 59 59 46 25 25 12 12 12 14 31 33 41 41 41 59 59 59 48 46 46 59 59 48 59 57 59 57 57 57 57 57 57 59 59 57 57 43 43 43 48 43 57 57 54 54 57 57 57 57 59 59 43 43 43 59 46 48 48 48 57 57 57 68 59 68 68 68 68 57 57 59 57 57 48 48 48 48 57 57 57 59 59 59 59 59 48 48 43 43 48 48 48 48 48 48 48 43 47 43 48 43 43 43 39 39 39 39 37 37 28 24 22 30 34 47 47 37 30 30 28 28 32 30 39 36 39 37 37 31 28 28 34 34 36 36 36 39 29 29 37 37 37 39 39 39 39 36 36 43 43 39 34 28 23 20 32 32 23 23 23 28 34 39 39 28 28 14 14 14 28 28 28 22 18 10 9 10 10 12 11 14 14 12 15 12 13 12 12 13 13 19 12 12 11 11 10 10 10 10 3 0 3 12 22 26 35 28 28 12 12 11 10 10 10 10 13 12 11 11 11 11 11 11 8 10 10 8 8 11 11 10 10 9 9 9 13 10 9 11 11 9 10 9 8 8 8 6 6 6 8 8 8 8 8 10 8 9 9 10 11 12 12 9 8 8 8 8 8 8 8 10 12 7 6 8 8 10 10 13 8 8 8 8 8 8 8 10 10 15 15 10 10 10 10 10 10 11 11 11 10 10 10 10 13 8 8 8 8 10 10 14 21 19 19 15 10 8 8 8 8 8 8 8 8 8 8 10 18 24 20 22 22 22 21 21 16 10 10 9 8 8 7 8 8 9 9 10 10 8 8 8 8 8 8 8 10 10 8 8 8 8 8 8 8 8 8 8 10 12 10 10 10 10 8 8 8 10 10 10 8 10 8 7 7 8 7 10 10 10 11 12 8 8 8 8 8 8 8 8 8 8 10 15 8 8 8 10 9 9 10 12 10 15 10 10 10 8 8 7 6 8 8 10 10 8 8 8 6 6 8 6 6 10 7 19 20 24 18 20 15 19 12 9 9 10 10 8 8 8 8 8 8 8 3 0	Open. Hide. 14 14 21 21 31 39 37 37 37 37 39 39 39 44 34 25 25 15 15 11 11 9 11 18 17 11 13 13 29 23 39 48 48 48 44 36 36 33 37 33 33 46 43 27 23 10 8 7 8 8 16 17 25 41 59 59 33 33 36 36 36 36 42 42 42 50 50 53 50 50 50 53 50 53 53 53 47 47 47 51 51 68 68 68 68 68 68 68 68 68 68 50 50 50 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 68 59 59 59 59 68 68 68 68 68 68 68 68 68 68 59 57 57 57 68 68 68 68 57 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 59 59 57 57 59 57 54 54 54 54 59 59 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 54 59 59 68 68 68 59 68 68 59 59 59 57 48 43 43 47 47 43 47 47 59 59 59 59 59 59 59 47 46 46 46 59 59 59 41 41 31 31 35 37 37 36 47 47 46 39 48 48 48 43 43 43 57 57 50 48 48 48 40 40 41 43 43 43 32 27 27 32 32 37 39 41 41 37 37 31 31 35 31 37 28 34 25 34 33 43 37 37 28 23 22 30 30 43 43 37 37 30 39 39 37 37 37 31 31 39 32 28 34 34 33 26 31 25 24 22 22 19 20 26 20 20 23 28 28 28 28 24 17 16 11 11 10 12 14 12 13 10 10 10 10 17 12 9 10 13 13 12 10 19 25 30 37 30 30 30 32 28 28 19 13 10 10 10 10 9 9 9 12 12 10 10 8 8 9 8 8 10 17 12 12 14 17 15 15 18 11 9 9 9 10 10 10 13 13 11 13 13 10 10 10 12 14 8 9 11 11 9 9 10 9 9 8 8 8 8 6 8 6 6 6 8 10 8 8 8 8 8 10 10 9 9 9 13 23 17 19 11 8 8 8 13 9 14 16 11 11 11 10 10 10 9 8 8 12 8 6 6 8 6 8 8 16 16 10 10 10 10 10 11 11 11 11 13 13 15 13 12 12 12 12 12 15 15 23 33 33 24 21 11 10 10 9 9 10 8 9 8 6 6 6 8 8 9 9 9 8 8 8 8 9 11 22 15 15 15 8 6 6 6 9 7 8 8 6 6 7 7 8 8 8 8 8 10 10 8 8 8 8 8 8 8 9 9 9 11 15 19 16 15 8 8 8 8 8 8 9 9 17 14 14 13 11 10 9 13 11 10 9 8 8 8 8 8 8 10 8 8 10 13 9 9 9 12 15 12 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no342_e12.g1 MSMg01no342_e12.g1 CHROMAT_FILE:
MSMg01no342_e12.g1 PHD_FILE: MSMg01no342_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:45 2005
         (438 letters)



>mm_chr4_34895969_34896806
          Length = 838

 Score =  692 bits (358), Expect = 0.0
 Identities = 379/386 (98%), Gaps = 1/386 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   agaggtcatgaataaatgctacataaaaccatcttctagtctgtcgtctttgcctgcctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agaggtcatgaataaatgctacataaaaccatcttctagtctgtcgtctttgcctgcctc 326

                                                                       
Query: 61  atctgtctgtcaccttgccctgttcctacgaggggtcaaaggaggaaaactgtggatttt 120
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aactgtctgtcaccttgccctgttcctacgaggggtcaaaggaggaaaactgtggatttt 266

                                                                       
Query: 121 acaaaagctaatccaaattttttttttgaaagcacacatgaacacacccacgttttaact 180
           |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acaaaagctaatccaaaaattttttttgaaagcacacatgaacacacccacgttttaact 206

                                                                       
Query: 181 ggtcattcaggttagttccagctcaggggtctctgggccctctttctgaagtacatagtg 240
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 205 ggtcattcaggttagttccagctcaggggtctctgggccctcttt-tgaagtacatagtg 147

                                                                       
Query: 241 tctttagtaatcaggacctacattcacactctggggccaggcatggtggggtagggggtg 300
           |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 tcttcagtaatcgggacctacattcacactctggggccaggcatggtggggtagggggtg 87

                                                                       
Query: 301 caaccaagtgcaatagtaatagactgttattttgggagtctcttggacagccctgactaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86  caaccaagtgcaatagtaatagactgttattttgggagtctcttggacagccctgactaa 27

                                     
Query: 361 caattcaaaagaaggcttcccatggc 386
           ||||||||||||||||||||| ||||
Sbjct: 26  caattcaaaagaaggcttcccgtggc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space:   355641
Effective search space used:   355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information