NAAATCATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCAGTGTTTCTCCGATTTCACTTTTTAATTTCTTTCTGAATCTT
ATAATTAAAATCAGTCCCCAAACTATCTGCTGATATAGTCTAACCTAAGA
TTCAACTTAATGTTACCACTCTCCATGTTTAGGTATTATGATCATGGTCT
CTTCACAAAACTTTCTGTATAAGTGTTTGGATCTGAACTCAGGAACTCAT
ATTTTCTGTAGTTGACAAATTCTCACATATTTTGAGATTAATTAAGGCAA
AGGGACTTAATAAAGATGTGACTTCTTATATAGCAGACAATCAAACTTTA
ATCAATAGAAGATGCATTTTAAAAGCTTGTTAAAATGGTAACTCATAGGA
TTTAATGCCAAAGATTTTGAACGATAGATCTTAGTTTTAACTCAAGGATC
TCAGATGAAGCAATGTTTAAATACTTTTCCTGGAGCACATCAGATTTTAG
AAACACAGGAAGTAACGGTGTATGTTCAATAAATAAGATCTAAAATCACA
TGAGTTCAGATGGCTTTTCAGACAGTCAGCTAGTTCCCAAAACTGAACAT
ATAAAGAAATAATAGCAAGAAAAAAATTCTTGTGGTTATATCAAGTACCT
ATGATTGGTAATCTCTATTAGTCCAAGTAACTTCATAAACATTTCTTTGG
ATTTCTTTTCCCATAAGCCCGGAGTCATATTGG

NTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAACACTTTTAA
CATGAAAGGGTGTTGTATTTTGTCAAAGGCTTTTTTTAGCATCTAATAAG
ATGATTATGTGTCTTTTTCTCTGTGAGTTTGTTATGTAGTGGATTATGTA
TACTACAGAGGAGTAGTGATTTAGATATAGCTGTCTCTTGTGAGACTACG
CCAGGGCGTATCAAACACATAAGTGGATGCTCACAGTCTGCTATTAGATG
GATAACAGGGCTCCCAATAGAGGAGCTCGAGAAAGTACCCAAGGAGCTAA
AGGGATCTGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTATC
CCTGAACTCTTGACTCTAGCTGCTTATGTATCAAAAGATGGCCTAGTCGG
ACATCACTGGAAAGAGAGGCCCATTGGACTTGCTAACTTTATATGCCCCA
GTACAGGGGAATGCCATGGCCAAAAAGTGGTATTGCTTAGGGAGAGTAGT
GGCCCCCCTACCCCAACACTCTTTTTATTCCTTTTCATCCTCTTACAAGT
TTTATAATACGTTTGTGTTTTTATTTGGTCTTATTTATTTGCTCTTTCCC
GTACCACTCATTCTTCCTTCCATTTTTTTTTTCTCTTCTCTTCTTCTACT
TCTCTCTCTTTTCTATTTCCACTTTTTTCTTTCCTCTCTCTATTGCTA

Query= MSMg01no344_c06.b1 MSMg01no344_c06.b1 CHROMAT_FILE:
MSMg01no344_c06.b1 PHD_FILE: MSMg01no344_c06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:14 2005
         (457 letters)



>mm_chr4_36172390_36173246
          Length = 857

 Score =  853 bits (441), Expect = 0.0
 Identities = 453/457 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcactttttaatttctttctgaatcttataattaaaatcagtccccaaactatctgctga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 tcactttttaatttctttctgaatcttataattaaaatcagtccccaaactatctgctga 598

                                                                       
Query: 61  tatagtctaacctaagattcaacttaatgttaccactctccatgtttaggtattatgatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 tatagtctaacctaagattcaacttaatgttaccactctccatgtttaggtattatgatc 538

                                                                       
Query: 121 atggtctcttcacaaaactttctgtataagtgtttggatctgaactcaggaactcatatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 atggtctcttcacaaaactttctgtataagtgtttggatctgaactcaggaactcatatt 478

                                                                       
Query: 181 ttctgtagttgacaaattctcacatattttgagattaattaaggcaaagggacttaataa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 477 ttctgtagttgacaaattctcacatattttgagattaattaaggcaaagggacataataa 418

                                                                       
Query: 241 agatgtgacttcttatatagcagacaatcaaactttaatcaatagaagatgcattttaaa 300
           |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 agatgtgacttcatatagagcagacaatcaaactttaatcaatagaagatgcattttaaa 358

                                                                       
Query: 301 agcttgttaaaatggtaactcataggatttaatgccaaagattttgaacgatagatctta 360
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 agcttgttaaaatggtaacccataggatttaatgccaaagattttgaacgatagatctta 298

                                                                       
Query: 361 gttttaactcaaggatctcagatgaagcaatgtttaaatacttttcctggagcacatcag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gttttaactcaaggatctcagatgaagcaatgtttaaatacttttcctggagcacatcag 238

                                                
Query: 421 attttagaaacacaggaagtaacggtgtatgttcaat 457
           |||||||||||||||||||||||||||||||||||||
Sbjct: 237 attttagaaacacaggaagtaacggtgtatgttcaat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space:   378609
Effective search space used:   378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)