Query= MSMg01no344_o01.b1 MSMg01no344_o01.b1 CHROMAT_FILE:
MSMg01no344_o01.b1 PHD_FILE: MSMg01no344_o01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:12 2005
(245 letters)
>mm_chr4_84446812_84447456
Length = 645
Score = 466 bits (241), Expect = e-136
Identities = 244/245 (99%)
Strand = Plus / Minus
Query: 1 gatcttgacaatccttctgccttagcctacagagcattagattacagatgcgaacttagc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 500 gatcttgacaatccttctgccttagcctacagagcattagattacagatgtgaacttagc 441
Query: 61 tcttttgtataaatttagagatggtcagtaaacttgattcccaaactgtcctggtgcagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcttttgtataaatttagagatggtcagtaaacttgattcccaaactgtcctggtgcagg 381
Query: 121 cttgttctcgagctagtgggtttttgggatggttgctgctactactgctggtgctactgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cttgttctcgagctagtgggtttttgggatggttgctgctactactgctggtgctactgt 321
Query: 181 ataagagaacaacatctttcaagaggtatctaccatggttttcattatgttccagagaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ataagagaacaacatctttcaagaggtatctaccatggttttcattatgttccagagaca 261
Query: 241 catga 245
|||||
Sbjct: 260 catga 256
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no344_o01.g1 MSMg01no344_o01.g1 CHROMAT_FILE:
MSMg01no344_o01.g1 PHD_FILE: MSMg01no344_o01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:12 2005
(191 letters)
>mm_chr4_84267531_84268120
Length = 590
Score = 339 bits (175), Expect = 9e-98
Identities = 187/191 (97%), Gaps = 1/191 (0%)
Strand = Plus / Plus
Query: 1 catgagaagttgcaggggagttatagcataaatggctaagaccaccagctctgctgcctc 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgagaagttgcaggagagttatagcataaatggctaagaccaccagctctgctgcctc 260
Query: 61 cagagttctgtatggtagctaaagagaaaggcagggcccaacagttttaagtgcccttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagagttctgtatggtagctaaagagaaaggcagggcccaacagttttaagtgcccttaa 320
Query: 121 ctaaatgtcaagctcggttacgcaatgggccacagatccaggactggggtcgacatgata 180
|||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 ctaaat-tcaagctcggttacgcaatgggccacagatccaggactggagtcgacatgata 379
Query: 181 cacttggctat 191
|||||| ||||
Sbjct: 380 cacttgtctat 390
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 191
Length of database: 590
Length adjustment: 8
Effective length of query: 183
Effective length of database: 582
Effective search space: 106506
Effective search space used: 106506
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
