MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-346G24
Chromosome	4 (Build37)
Map Location	137,273,422 - 137,273,666
singlet/doublet	singlet
Overlap gene	Rap1gap
Upstream gene	Ephb2, C1qb, C1qc, C1qa, Epha8, Zbtb40, Wnt4, Cdc42, LOC665533, LOC242711, Ela3, 1700013G24Rik, Hspg2, Ldlrad2, Usp48
Downstream gene	Akp2, Ece1, LOC100040558, Eif4g3, Hp1bp3, Kif17, Ddost, Pink1, Cda, LOC625638, LOC625646, 0610009K11Rik, Camk2n1, LOC100040618, 4931403E03Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ephb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13844 MGI:99611
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C1qb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12260 MGI:88224
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C1qc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12262 MGI:88225
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C1qa (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12259 MGI:88223
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Epha8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13842 MGI:109378
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zbtb40 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230848 MGI:2682254
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wnt4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22417 MGI:98957
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cdc42 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12540 MGI:106211
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665533 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665533
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 514 ESTs, 6 Proteins

name	LOC242711 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:242711
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 ESTs, 13 Proteins pseudo : _no_value

name	Ela3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67868 MGI:1915118
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700013G24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69380 MGI:1916630
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hspg2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15530 MGI:96257
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 189 ESTs, 5 Proteins

name	Ldlrad2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435811 MGI:3588210
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Usp48 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170707 MGI:2158502
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rap1gap (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110351 MGI:109338
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Akp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11647 MGI:87983
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ece1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230857 MGI:1101357
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040558 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040558
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs

name	Eif4g3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230861 MGI:1923935
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hp1bp3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15441 MGI:109369
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kif17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16559 MGI:1098229
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ddost (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13200 MGI:1194508
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pink1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68943 MGI:1916193
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cda (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72269 MGI:1919519
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC625638 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625638
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC625646 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625646
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 489 ESTs, 4 Proteins

name	0610009K11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68350 MGI:1915600
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Camk2n1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66259 MGI:1913509
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040618 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040618
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	4931403E03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75718 MGI:1922968
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 3 ESTs, 6 Proteins

name	Ephb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129939 GeneID:13844 MGI:99611
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Eph receptor B2 transcript_id : NM_010142.2

name	C1qb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133893071 GeneID:12260 MGI:88224
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : complement component 1, q subcomponent, beta polypeptide transcript_id : NM_009777.2

name	C1qc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113680119 GeneID:12262 MGI:88225
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : complement component 1, q subcomponent, C chain transcript_id : NM_007574.2

name	C1qa (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286804 GeneID:12259 MGI:88223
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : complement component 1, q subcomponent, alpha polypeptide transcript_id : NM_007572.2

name	Epha8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679662 GeneID:13842 MGI:109378
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Eph receptor A8 transcript_id : NM_007939.1

name	Zbtb40 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38016186 GeneID:230848 MGI:2682254
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger and BTB domain containing 40 transcript_id : NM_198248.1

name	Wnt4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678594 GeneID:22417 MGI:98957
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : wingless-related MMTV integration site 4 transcript_id : NM_009523.1

name	Cdc42 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753363 GeneID:12540 MGI:106211
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell division cycle 42 homolog (S. cerevisiae) transcript_id : NM_009861.1

name	LOC665533 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94372584 GeneID:665533
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 514 ESTs, 6 Proteins product : similar to ribosomal protein L31 transcript_id : XM_977600.1

name	Ela3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129812 GeneID:67868 MGI:1915118
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : elastase 3, pancreatic transcript_id : NM_026419.2

name	1700013G24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124378009 GeneID:69380 MGI:1916630
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700013G24 gene transcript_id : NM_027063.2

name	Hspg2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149253149 GeneID:15530 MGI:96257
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 189 ESTs, 5 Proteins product : perlecan (heparan sulfate proteoglycan 2) transcript_id : XM_978879.2

name	Ldlrad2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85702178 GeneID:435811 MGI:3588210
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : low density lipoprotein receptor A domain containing 2 transcript_id : NM_001033979.1

name	Usp48 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114053324 GeneID:170707 MGI:2158502
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin specific peptidase 48 transcript_id : NM_130879.2

name	Rap1gap (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487210 GeneID:110351 MGI:109338
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rap1 GTPase-activating protein transcript_id : NM_001081155.1

name	Akp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6671532 GeneID:11647 MGI:87983
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : alkaline phosphatase 2, liver transcript_id : NM_007431.1

name	Ece1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40556285 GeneID:230857 MGI:1101357
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : endothelin converting enzyme 1 transcript_id : NM_199307.1

name	LOC100040558 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253151 GeneID:100040558
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs product : hypothetical protein LOC100040558 transcript_id : XM_001474904.1

name	Eif4g3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50838805 GeneID:230861 MGI:1923935
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : eukaryotic translation initiation factor 4 gamma, 3 transcript_id : NM_172703.2

name	Hp1bp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33468902 GeneID:15441 MGI:109369
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heterochromatin protein 1, binding protein 3 transcript_id : NM_010470.1

name	Kif17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130047 GeneID:16559 MGI:1098229
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kinesin family member 17 transcript_id : NM_010623.3

name	Ddost (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46195797 GeneID:13200 MGI:1194508
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dolichyl-di-phosphooligosaccharide-proteinglycotransferase transcript_id : NM_007838.2

name	Pink1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126215544 GeneID:68943 MGI:1916193
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PTEN induced putative kinase 1 transcript_id : NM_026880.2

name	Cda (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037288 GeneID:72269 MGI:1919519
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytidine deaminase transcript_id : NM_028176.1

name	LOC625638 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:126157458 GeneID:625638
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Likely orthologue of human family with sequence similarity 43, member B (FAM43B) transcript_id : NM_001081672.1

name	LOC625646 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253178 GeneID:625646
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 489 ESTs, 4 Proteins product : similar to ribosomal protein L38 transcript_id : XM_890220.3

name	0610009K11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40548428 GeneID:68350 MGI:1915600
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 0610009K11 gene transcript_id : NM_026689.3

name	Camk2n1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113930674 GeneID:66259 MGI:1913509
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium/calmodulin-dependent protein kinase II inhibitor 1 transcript_id : NM_025451.1

name	4931403E03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149253179 GeneID:75718 MGI:1922968
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 3 ESTs, 6 Proteins product : RIKEN cDNA 4931403E03 gene transcript_id : XM_144060.5

name	Ephb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47777351 CCDS:CCDS18809.1 GeneID:13844 MGI:99611
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA]; GO:0045202 - synapse [Evidence NAS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008046 - axon guidance receptor activity [Evidence IDA]; GO:0005003 - ephrin receptor activity [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA] [Evidence IDA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005102 - receptor binding [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0005005 - transmembrane-ephrin receptor activity [Evidence TAS] GO_process : GO:0007411 - axon guidance [Evidence IDA]; GO:0007612 - learning [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0048170 - positive regulation of long-term neuronal synaptic plasticity [Evidence IMP]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0050770 - regulation of axonogenesis [Evidence IDA]; GO:0048168 - regulation of neuronal synaptic plasticity [Evidence IMP]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IDA] codon_start : 1 product : Eph receptor B2 protein_id : NP_034272.1

name	C1qb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753220 CCDS:CCDS18810.1 GeneID:12260 MGI:88224
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_process : GO:0006956 - complement activation [Evidence IEA]; GO:0006958 - complement activation, classical pathway [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0045087 - innate immune response [Evidence IEA]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 product : complement component 1, q subcomponent, B chain protein_id : NP_033907.1

name	C1qc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113680120 CCDS:CCDS18811.1 GeneID:12262 MGI:88225
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_process : GO:0006956 - complement activation [Evidence IEA]; GO:0006958 - complement activation, classical pathway [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0045087 - innate immune response [Evidence IEA]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 note : complement component 1, q subcomponent, c polypeptide product : complement component 1, q subcomponent, gamma polypeptide protein_id : NP_031600.2

name	C1qa (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124286805 CCDS:CCDS18812.1 GeneID:12259 MGI:88223
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_process : GO:0006956 - complement activation [Evidence IEA]; GO:0006958 - complement activation, classical pathway [Evidence IMP]; GO:0006955 - immune response [Evidence IEA]; GO:0045087 - innate immune response [Evidence IEA]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 product : complement component 1, q subcomponent, A chain protein_id : NP_031598.2

name	Epha8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679663 CCDS:CCDS18813.1 GeneID:13842 MGI:109378
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005003 - ephrin receptor activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IEA] codon_start : 1 exception : mismatches in translation product : Eph receptor A8 protein_id : NP_031965.1

name	Zbtb40 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38016187 CCDS:CCDS18814.1 GeneID:230848 MGI:2682254
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : zinc finger and BTB domain containing 40 protein_id : NP_937891.1

name	Wnt4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678595 CCDS:CCDS18815.1 GeneID:22417 MGI:98957
definition	GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0005102 - receptor binding [Evidence TAS]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IMP]; GO:0007267 - cell-cell signaling [Evidence TAS]; GO:0007275 - development [Evidence IEA]; GO:0001838 - embryonic epithelial tube formation [Evidence IDA]; GO:0008585 - female gonad development [Evidence IMP]; GO:0007223 - frizzled-2 signaling pathway [Evidence IEA]; GO:0007276 - gametogenesis [Evidence IGI]; GO:0042445 - hormone metabolism [Evidence IMP]; GO:0008584 - male gonad development [Evidence IMP]; GO:0045596 - negative regulation of cell differentiation [Evidence IMP]; GO:0048599 - oocyte development [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence IMP] [Evidence TAS]; GO:0007548 - sex differentiation [Evidence IMP]; GO:0007165 - signal transduction [Evidence TAS]; GO:0051145 - smooth muscle cell differentiation [Evidence IMP] [Evidence IDA]; GO:0035239 - tube morphogenesis [Evidence IMP]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 note : signal molecule product : wingless-related MMTV integration site 4 protein_id : NP_033549.1

name	Cdc42 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753364 CCDS:CCDS18816.1 GeneID:12540 MGI:106211
definition	GO_component : GO:0042995 - cell projection [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0030742 - GTP-dependent protein binding [Evidence IPI]; GO:0003924 - GTPase activity [Evidence ISS] [Evidence TAS] [Evidence NAS] [Evidence IDA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0051301 - cell division [Evidence IEA]; GO:0046847 - filopodium formation [Evidence IDA]; GO:0007097 - nuclear migration [Evidence IMP]; GO:0043552 - positive regulation of phosphoinositide 3-kinase activity [Evidence IMP]; GO:0007266 - Rho protein signal transduction [Evidence TAS] citation : [PUBMED 8817303] codon_start : 1 function : GTP-binding protein product : cell division cycle 42 homolog protein_id : NP_033991.1

name	LOC665533 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94372585 GeneID:665533
definition	codon_start : 1 product : hypothetical protein protein_id : XP_982694.1

name	Ela3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385916 CCDS:CCDS18817.1 GeneID:67868 MGI:1915118
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : elastase 3B, pancreatic protein_id : NP_080695.1

name	1700013G24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312286 CCDS:CCDS18818.1 GeneID:69380 MGI:1916630
definition	codon_start : 1 product : hypothetical protein LOC69380 protein_id : NP_081339.1

name	Hspg2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149253150 GeneID:15530 MGI:96257
definition	codon_start : 1 product : perlecan (heparan sulfate proteoglycan 2) protein_id : XP_983973.2

name	Ldlrad2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702179 CCDS:CCDS18819.1 GeneID:435811 MGI:3588210
definition	codon_start : 1 product : low density lipoprotein receptor A domain containing 2 protein_id : NP_001029151.1

name	Usp48 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114053325 GeneID:170707 MGI:2158502
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA] GO_process : GO:0006464 - protein modification [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 note : ubiquitin specific protease 31 product : ubiquitin specific protease 48 protein_id : NP_570949.2

name	Rap1gap (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487211 GeneID:110351 MGI:109338
definition	GO_function : GO:0005096 - GTPase activator activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : Rap1, GTPase-activating protein 1 protein_id : NP_001074624.1

name	Akp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671533 CCDS:CCDS18821.1 GeneID:11647 MGI:87983
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004035 - alkaline phosphatase activity [Evidence IEA]; GO:0048503 - GPI anchor binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : Tissue Non-Specific Alkaline Phosphatase; tissue-nonspecific alkaline phosphatase product : alkaline phosphatase 2, liver protein_id : NP_031457.1

name	Ece1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40556286 CCDS:CCDS18822.1 GeneID:230857 MGI:1101357
definition	GO_component : GO:0009986 - cell surface [Evidence ISS]; GO:0005794 - Golgi apparatus [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016512 - endothelin-converting enzyme 1 activity [Evidence IEA]; GO:0016511 - endothelin-converting enzyme activity [Evidence ISS]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0004245 - neprilysin activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0016486 - peptide hormone processing [Evidence ISS]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : endothelin-converting enzyme-1b; endothelin-converting enzyme-1d; endothelin-converting enzyme-1a product : endothelin converting enzyme 1 protein_id : NP_955011.1

name	LOC100040558 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253152 GeneID:100040558
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474954.1

name	Eif4g3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50838806 GeneID:230861 MGI:1923935
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0003743 - translation initiation factor activity [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0006417 - regulation of protein biosynthesis [Evidence IEA]; GO:0006445 - regulation of translation [Evidence IEA]; GO:0006446 - regulation of translational initiation [Evidence IEA] codon_start : 1 product : eukaryotic translation initiation factor 4 gamma, 3 protein_id : NP_766291.2

name	Hp1bp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33468903 GeneID:15441 MGI:109369
definition	GO_process : GO:0007275 - development [Evidence IEA] codon_start : 1 exception : mismatches in translation product : heterochromatin protein 1, binding protein 3 protein_id : NP_034600.1

name	Kif17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13487898 CCDS:CCDS18823.1 GeneID:16559 MGI:1098229
definition	GO_component : GO:0005871 - kinesin complex [Evidence IDA]; GO:0005874 - microtubule [Evidence IEA]; GO:0005875 - microtubule associated complex [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003777 - microtubule motor activity [Evidence IDA]; GO:0003774 - motor activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007018 - microtubule-based movement [Evidence IEA]; GO:0007017 - microtubule-based process [Evidence IDA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0016192 - vesicle-mediated transport [Evidence IDA] codon_start : 1 note : kinesin 17; N-4 kinesin product : kinesin family member 17 protein_id : NP_034753.1

name	Ddost (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46195798 CCDS:CCDS18824.1 GeneID:13200 MGI:1194508
definition	GO_component : GO:0005789 - endoplasmic reticulum membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0008250 - oligosaccharyl transferase complex [Evidence ISS] GO_function : GO:0004579 - dolichyl-diphosphooligosaccharide-protein glycotransferase activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0018279 - protein amino acid N-linked glycosylation via asparagine [Evidence ISS] [Evidence IEA] codon_start : 1 product : dolichyl-di-phosphooligosaccharide-proteinglycotransferase protein_id : NP_031864.2

name	Pink1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126215545 CCDS:CCDS18825.1 GeneID:68943 MGI:1916193
definition	GO_component : GO:0005739 - mitochondrion [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IEA] [Evidence IDA]; GO:0016301 - kinase activity [Evidence ISS] [Evidence IDA]; GO:0000287 - magnesium ion binding [Evidence IEA] [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA] [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] [Evidence IDA]; GO:0007243 - protein kinase cascade [Evidence IDA]; GO:0006950 - response to stress [Evidence ISS] codon_start : 1 product : PTEN induced putative kinase 1 protein_id : NP_081156.2

name	Cda (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037289 CCDS:CCDS18826.1 GeneID:72269 MGI:1919519
definition	GO_component : GO:0005829 - cytosol [Evidence ISS]; GO:0005576 - extracellular region [Evidence ISS] GO_function : GO:0004126 - cytidine deaminase activity [Evidence ISS]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0042802 - identical protein binding [Evidence IPI]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0001882 - nucleoside binding [Evidence ISS]; GO:0042803 - protein homodimerization activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence ISS] [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence ISS]; GO:0009972 - cytidine deamination [Evidence ISS]; GO:0046087 - cytidine metabolism [Evidence IEA]; GO:0019858 - cytosine metabolism [Evidence ISS]; GO:0030308 - negative regulation of cell growth [Evidence ISS]; GO:0045980 - negative regulation of nucleotide metabolism [Evidence ISS]; GO:0051289 - protein homotetramerization [Evidence ISS]; GO:0008655 - pyrimidine salvage [Evidence ISS] codon_start : 1 product : cytidine deaminase protein_id : NP_082452.1

name	LOC625638 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:126157459 GeneID:625638
definition	codon_start : 1 product : hypothetical protein LOC625638 protein_id : NP_001075141.1

name	LOC625646 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82895306 GeneID:625646
definition	codon_start : 1 product : similar to ribosomal protein L38 protein_id : XP_895313.1

name	0610009K11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541787 CCDS:CCDS18828.1 GeneID:68350 MGI:1915600
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC68350 protein_id : NP_080965.2

name	Camk2n1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113930675 GeneID:66259 MGI:1913509
definition	GO_component : GO:0005829 - cytosol [Evidence ISS]; GO:0030027 - lamellipodium [Evidence ISS]; GO:0001726 - ruffle [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0007155 - cell adhesion [Evidence ISS]; GO:0016477 - cell migration [Evidence ISS] codon_start : 1 note : CaMKII inhibitor protein alpha; CaMKIIN-alpha; CaMKIINalpha product : calcium/calmodulin-dependent protein kinase II inhibitor 1 protein_id : NP_079727.1

name	4931403E03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38078910 GeneID:75718 MGI:1922968
definition	codon_start : 1 product : hypothetical protein LOC75718 protein_id : XP_144060.2

name	LOC100040618 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040618
definition	number : 2 pseudo : _no_value

name	LOC100040618 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040618
definition	number : 1 pseudo : _no_value

name	LOC242711 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253177 GeneID:242711
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 ESTs, 13 Proteins product : similar to elastase 3B, pancreatic pseudo : _no_value transcript_id : XR_034091.1

clone name	MSMg01-439A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-205K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338D04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-434K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406P20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-437E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035P06
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-346G24.T7 (MSMg01no346_g24.b1)	MSMg01-346G24.TJ (MSMg01no346_g24.g1)
ACC	AG459025	AG459026
length	780	771
length of high quality (start - end)	249 (34 - 282)	419 (63 - 481)
definition	CHROMAT_FILE: MSMg01no346_g24.b1 PHD_FILE: MSMg01no346_g24.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:37:08 2005	CHROMAT_FILE: MSMg01no346_g24.g1 PHD_FILE: MSMg01no346_g24.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:37:08 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCACGAAG GTAGGACTTTCCTCGTTGGTACTGAATAGTTCTTCCTCAGAGGTCTGGAG ACCACACGGGGGCAAGGTCACACGGTGGCAGCTCCCGAGTGGCCCTCCCT CAGCCCTACTTCCTCCCAGAGTGGCCATGAGCAGTCCCCAAGCTCCTGGG AAACGGAGTGCCCTGCAGGCGACGGCTGAGGGCGAGGTGGGGTGGGGTGG GCCGCAGGACCAGGCGGGGGGGGGGGGGGGGNANNNNNNNNNNNNNNNNN NNNNNNNTTTTTTTTTTNNNTTTTNNNNTTTTTTTNNTTTTTTTTTTTTT TTTTTTTTTTTTTTNNNTNNTTNTTTTTTTTTTTTTTTTTTTTTTTNNTT TNTNTTTTTTNTNTTTTTTTTTTTNNNTTTTTTTTTTTTTTTTTTTTTTN NNTTTTTTNTTTTTTTTTNTTTTTTTTTTNTTTTTTTTNTTTTTTTTTTT TTNTTTTTTTTTTTTTTTTTTNTTTTTTTNTTTTTTTTTTTTTTTTTTTT TTTNTTTTTTNNNTTTTNTTTTTTTTTTTTTTNNNNTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTTNTNNNTTNTTTTTTTTTTTTTTTTTTTTTTTTN TTCCCTTTNCCTCCTTTTTTTTTTCTTTTTNNTTTTNTCTTTTTTTTTTT CCTCCTTTCCTNTTCTTTTCTTCTTTTCCC	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXCACATATTTAAAAGTAAGAGCCAGGCAGTGGTGGCGCA CACCTTTAATCCCAGCACTTGAGAGGCAGAGACAGGCGGATTTCTGAGTT CGAGGCCAGCCTGGTCTACAAAGTGAGTTACAGGACAGCCAGGGCTACAC AGAGAAACCTTGTCTCGCAAAAAAAAAAAAAAAAAAAAAAGTAAGAATCT GCGAGCTGGAGAGATGGCTCAGTGGGTAAGAGCACTGGCTGCTCTTCCAG AGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAGGCATCTA CAATGGATCTGATGTCCTCTTCTCGTATGTTTGAGGACAGCTACAGTGTA CTCATAGACATATAAAGAAATCATTCTTTAAAAGACAATAAATAAAAGTA AAAAATCTGCAAATCTGTGACAGGGTTGGAGAGATAATGGCTCAGCTAAG GGTGCCTGCGGCTCCTCCCATGTTCATCANGAAGCTCATAGCTGCCTATG ACTCCCGATCTAGGAGATTTGACATCTCTTATAACCTCCCCAAGAATTAT GTGTGGTTAACCACCCTCCCTCCCTCCCCCCCGAGGGACCCCCTACCCCC AAAGGACCTCTTTCCCCCCGAAACCGCCCCTTTTCCCCCCCCAAGATACC CCTTTGGGCCGGGGACGAACATTCCTTTTGGTAGGAAAAAGTGGACTCCT GTGTTTTAAGCCCCCCCCCCC
quality values	Open. Hide. 12 12 14 14 15 11 8 8 11 11 24 29 44 30 29 22 22 28 30 27 23 12 11 10 10 10 10 25 19 19 10 9 9 22 28 48 48 35 35 28 36 36 37 43 37 40 47 43 25 13 8 8 8 10 12 30 43 48 54 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 68 68 68 68 68 68 68 59 59 59 68 68 59 59 68 68 68 68 68 68 68 68 68 68 57 57 59 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 48 36 37 37 40 40 50 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 59 27 27 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 10 11 19 13 9 8 8 3 0 0 0 3 8 8 3 0 0 0 0 3 13 18 10 9 9 3 0 0 3 9 9 9 12 9 13 10 10 17 22 37 37 36 19 15 18 13 12 11 12 10 10 6 7 6 3 0 0 0 3 0 0 3 3 0 3 8 8 10 8 8 8 8 8 6 6 6 6 8 12 10 20 20 15 17 7 7 3 0 0 3 13 3 0 3 0 3 17 12 10 8 3 0 3 0 3 10 18 9 9 9 15 7 7 6 3 0 0 0 3 9 10 10 18 13 11 8 6 6 6 8 9 9 9 9 8 12 8 10 13 3 0 0 0 3 15 9 9 9 3 0 3 8 8 11 15 13 12 10 3 0 3 9 9 9 13 11 9 7 7 3 0 3 6 7 7 6 6 6 3 0 3 7 8 8 8 19 13 8 8 11 17 9 3 0 3 9 10 8 8 8 8 8 8 8 6 7 8 6 6 6 10 3 0 3 9 9 8 7 7 3 0 3 6 8 11 15 11 8 7 9 9 9 10 12 10 8 8 8 8 8 8 12 14 3 0 3 9 9 12 10 3 0 0 0 3 9 9 3 0 3 10 9 8 9 9 9 9 9 9 9 7 8 3 0 0 0 0 3 12 12 16 15 11 8 8 8 8 8 10 9 9 9 9 11 11 10 10 9 9 9 10 11 11 11 11 8 8 10 9 10 11 13 9 9 9 9 10 10 9 7 8 7 7 8 12 10 9 8 8 8 9 9 9 11 13 13 9 9 10 10 8 8 8 8 8 8 8 8 6 7 6 6 10 18 14 10 10 3 0 3 0 0 0 3 3 0 3 8 10 10 13 14 14 18 10 7 6 7 6 6 10 10 10 15 8 6 6 6 7 3 0 3 6 6 7 6 6 6 3 0 3 6 6 8 20 19 30 28 22 23 11 11 10 6 6 6 8 15 17 11 3 0 0 3 8 8 3 0 3 12 13 11 14 17 17 10 12 9 9 9 9 7 10 10 12 13 12 8 8 8 8 3 0 3 17 17 37 17 18 11 11 11 15 12 11 11 11 13 13 10 10	Open. Hide. 6 6 6 7 9 27 37 39 37 37 32 31 31 31 31 32 34 31 37 25 23 12 9 12 11 11 10 10 12 12 21 21 32 30 16 17 10 10 11 22 23 43 50 48 48 53 43 36 39 34 33 34 34 39 39 43 36 47 42 42 42 42 28 29 29 42 43 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 57 57 57 57 59 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 57 68 68 68 68 68 68 68 68 68 68 57 57 59 59 57 57 57 68 68 57 57 57 62 62 62 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 52 52 52 57 57 57 57 57 57 57 57 57 57 57 59 59 59 59 59 52 52 52 57 57 57 57 57 57 59 57 57 59 59 57 59 59 57 57 57 52 52 57 59 59 59 59 59 59 59 57 57 57 57 57 54 52 52 59 59 57 59 59 59 57 68 57 57 57 57 57 54 50 50 41 41 41 59 59 57 59 59 59 59 59 68 59 59 57 59 57 57 48 48 48 57 57 59 59 57 57 57 57 57 57 57 57 57 57 57 57 59 59 57 57 57 47 47 43 57 44 48 48 59 59 54 54 48 48 48 48 48 50 46 46 33 33 30 33 33 43 43 47 47 43 43 43 43 40 47 39 39 35 47 39 47 47 59 48 57 47 48 48 48 39 39 47 43 43 34 34 28 28 39 39 39 39 36 36 39 43 43 43 43 43 43 43 43 43 39 39 39 59 44 48 39 34 39 32 29 24 17 17 22 22 31 31 31 20 20 20 23 23 23 26 22 25 25 27 25 25 14 14 13 18 13 14 14 17 19 18 18 23 19 22 12 12 12 12 9 10 11 11 8 8 11 13 14 22 11 11 11 12 12 12 15 12 18 14 21 12 12 12 11 9 9 9 11 11 17 3 0 3 15 12 21 12 12 15 12 12 11 12 12 12 12 12 11 17 17 21 21 16 15 13 14 12 11 11 9 10 10 10 8 8 8 8 8 8 8 8 8 17 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 12 12 15 13 11 9 9 9 9 10 9 11 9 9 9 9 9 8 8 8 8 8 8 10 10 11 16 12 14 13 17 10 10 10 8 7 8 8 8 6 8 8 8 6 8 8 8 8 8 10 12 13 16 9 8 7 7 7 8 8 10 11 10 10 10 8 8 8 10 10 9 11 12 13 11 17 22 23 18 21 10 9 9 9 9 9 9 11 15 12 10 9 9 13 9 20 25 28 24 30 32 22 16 11 11 11 11 8 9 8 8 8 9 16 19 22 14 11 11 10 10 8 8 9 8 6 6 6 8 6 6 6 6 8 8 9 10 8 8 8 6 8 6 6 6 6 16 11 11 9 12 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 10 10 10 13 16 22 37 20 22 20 16 14 11

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no346_g24.b1 MSMg01no346_g24.b1 CHROMAT_FILE:
MSMg01no346_g24.b1 PHD_FILE: MSMg01no346_g24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:08 2005
         (249 letters)



>mm_chr4_137273271_137273919
          Length = 649

 Score =  466 bits (241), Expect = e-136
 Identities = 244/245 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattccacgaaggtaggactttcctcgttggtactgaatagttcttcctcagaggtct 63
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ggaattccacgaaggcaggactttcctcgttggtactgaatagttcttcctcagaggtct 337

                                                                       
Query: 64  ggagaccacacgggggcaaggtcacacggtggcagctcccgagtggccctccctcagccc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ggagaccacacgggggcaaggtcacacggtggcagctcccgagtggccctccctcagccc 277

                                                                       
Query: 124 tacttcctcccagagtggccatgagcagtccccaagctcctgggaaacggagtgccctgc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tacttcctcccagagtggccatgagcagtccccaagctcctgggaaacggagtgccctgc 217

                                                                       
Query: 184 aggcgacggctgagggcgaggtggggtggggtgggccgcaggaccaggcggggggggggg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 aggcgacggctgagggcgaggtggggtggggtgggccgcaggaccaggcggggggggggg 157

                
Query: 244 ggggg 248
           |||||
Sbjct: 156 ggggg 152


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space:   153600
Effective search space used:   153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information