XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTC
CATGTTAATGAGGTACATAGAGGACTAGAGGGCATGGATAATAAGCTTCT
CTTCCCAGACATTTCTACCTACAAAAGGTATTTAATGTCAGGCTTACCCT
GAGAAGGGGGCGAGGGGGTTCGGTATTCCTCATCCATTTTCCACCATGAC
AATAAACTGTTTAGAGCCATAGACTGTTTCTCTTCACCAAGATCCACTGT
GGGGAAGAAGGCCTTCGCCTACAGATCCTCAGCCTAATTTCCCAGAGAAA
GCCTCTCTATGCTCCCAGCCACAACCTCCACCAAGCCTGCCACAATCAAT
CCAATGGGACAAGCCAGAGCTCCCCTTCTTCCTCCAACCCCCTCATGCTG
GCCCTGGGCCAGATGCTGTCCCCAGCCCTCAGGACCCAGCTCCATTATCT
GCTCTTTTGTGACTCCCAGTGTNGGACCTGAAAGTCCAAAACTCTGATAA
ACCCCCCTATCCTGTCCTCATTGTGGGCCAGGGAGCCCCAAAACCAGCTC
CGGTTTTCCCCAACTCTTTTCCCTGGTACAGTCCTGGAATTATCGTCTGG
AATATGCTTCCAAGCCTGCTGCTGTTTGCCACCCTGGTGGTTAAAAATAA
AAGTTTTCCAACTTTTTTTCCCCATTCGCCCCCGCTGATTTCCGCCTACT
CATACTTTTCCCCCTTCTTTTACTTCGTTTTACACTTTACCTCTGC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCACACCTCTTAAAATAATTCCCAAACCTTAAC
CGTCCCTTGTACACTGGACCAATTCTAATTGTCTTCAGTAATACATTTTT
GTGAAATAAAGAAGATATGAATTTGGGAGTGGTATATGTTGAAGTTAGTC
TAGAGATATGGGAAAATAGTGAAGCAAATATTATCAAAATAAAAAATACA
CATGCATGTAACACACAAAGAACAAATTTAAGCTCTTTCTTATACAAGTA
CACACACACACACACACACACACACACACACACACACACACACACACCAA
AGTTCAGAAGTAATCAAAGAATAGAAGGAAGAAGAGAGGGGGAGGGAAAA
AGGAGGGCAGGATCAGGTATGGGAGCAGACAGGGATGATCTACAGAGGGT
CAGGAAATTGAACAGGGGTATGTGGCAAGGGTGGGTAGCCACTATAAAGC
TCCAGATGCTAGGAAAGGAAGAGACTCCCAGGACCCAATGGGGATGAAAT
TAACTGAAATGTCCATCTAAGGGGAAGGAGAAACTGTGTTTGATCATATC
TTGAGGTCTGTTTATGGCTTCCGTTTGGAAAAGGGCATCATTCCCCTTTC
CCCAATTTTTATCCCCAAATTCGCCCCCTGTTCAAAGTAAAATTTGCTGA
TCTCATTTTACCGCTACGTTTATTCCCATATTCTGTCTTCCGGTTTTTCC
CCTCTATACCCTA

Query= MSMg01no346_h05.g1 MSMg01no346_h05.g1 CHROMAT_FILE:
MSMg01no346_h05.g1 PHD_FILE: MSMg01no346_h05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:09 2005
         (418 letters)



>mm_chr4_17587066_17587883
          Length = 818

 Score =  743 bits (384), Expect = 0.0
 Identities = 402/418 (96%), Gaps = 16/418 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   cacacctcttaaaataattcccaaaccttaaccgtcccttgtacactggaccaattctaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacacctcttaaaataattcccaaaccttaaccgtcccttgtacactggaccaattctaa 260

                                                                       
Query: 61  ttgtcttcagtaatacatttttgtgaaataaagaagatatgaatttgggagtggtatatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgtcttcagtaatacatttttgtgaaataaagaagatatgaatttgggagtggtatatg 320

                                                                       
Query: 121 ttgaagttagtctagagatatgggaaaatagtgaagcaaatattatcaaaataaaaaata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgaagttagtctagagatatgggaaaatagtgaagcaaatattatcaaaataaaaaata 380

                                                                       
Query: 181 cacatgcatgtaacacacaaagaacaaatttaagctctttcttatacaagtacacacaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacatgcatgtaacacacaaagaacaaatttaagctctttcttatacaagtacacacaca 440

                                                                       
Query: 241 cacacacacacacacacacacacacacacacacacacaccaaagttcagaagtaatcaaa 300
           |||||||||||||||||||||||                |||||||||||||||||||||
Sbjct: 441 cacacacacacacacacacacac----------------caaagttcagaagtaatcaaa 484

                                                                       
Query: 301 gaatagaaggaagaagagagggggagggaaaaaggagggcaggatcaggtatgggagcag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gaatagaaggaagaagagagggggagggaaaaaggagggcaggatcaggtatgggagcag 544

                                                                     
Query: 361 acagggatgatctacagagggtcaggaaattgaacaggggtatgtggcaagggtgggt 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 acagggatgatctacagagggtcaggaaattgaacaggggtatgtggcaagggtgggt 602


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space:   330881
Effective search space used:   330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)