XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAA
TATACGATGTATAAATATGATGCTAAATAGTTGTAATAATGTTATAATTA
TTATTTGTTAGCTGACAGCTCCTTGTCAATTTTATAGATAAGAGTATCTG
GTATGGAGTTCACAATGCTTGGCCCTCATGGGCTTATGGGATTCTATGAA
ACATAATAATAGATGTACCCAGCAGAAATGCAACCCTAGTAACCCCCACT
GATGGAAAAATTATGAAATGAATTTGGCTGAAGAATATGAAGACAAGCAG
AGTTCTCTTATGACTCTACAACAAAAATGCTAACTAATAGTAGCTTGAGA
TGGATCCAGTTTGGAGTAAGAGTCAGTTCTGTCCCAGAGCCTCATTCTTC
TTTGTTGTGGCTCCTGCTAAAGGAAAATTGAAAGTCCGATGGTGCCTGCC
TGTCTGCCTGCCTGGTTTTTACCTTTCATAATGCTCTAATTTTATCTGCT
TTTCTTGCTCTTTTTTTTANTTGCATATTATAATTGCACATATCTTTAGG
ACATCATGTTGCTATGATTAAAGACATTAATATTTTCCCTTTTACCACAT
TTGCATCTTTTGTGCATTTGAAATTTTTTCCAAACTCAATTTCCTCTTTT
GTTGCCAATAGCTTGACCCCCTCGTTTGGACCTTTTTTATGGGACCTTCC
GCTTCCCTACCTAATCTTCATTATAAATTTCTTTCTTCCCCTTTTTCCTA
CTTTTATCACCTTCA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCTTCTTTATGTCCTCTACCATCATCATGAGAT
ATGCTTTTAAATCCAGGTCTACCTTTTCAGGTGTGTTAGGGTGTCCTGGA
TTGGGCGAAGTGGGCGTTCTGGGTTCTGATGATGGTGAGTGGTCCTGGCT
TCTGTTAGTAGGATTCTTACGTTTACCTTTCGCCATCTGGCAATCTCTGG
AGTTAGTTGTTATAGTTGTCTTTGTTAAAAGATTGTTCCTCTGTTGATTT
TGTTACCCTCTATCAGCAGGCGTGGGAGACAAGCTCTCTTCTCTGAGTTT
CAGTGGTCAGAGCAGTCTCTGTAGGCAAGCTCTCCTCTCTCAGGGAAGGT
GTACAGTTATCTGGTGTTTGGACCTCCTCCTGGCTGAAGGTGAAGGCCCA
AAACAGGATCTTTCCCAGAAGCTGTGTTGCTTTGGCCAGGAAGGTGGCCA
GTTGTCTGGAGTCGAATATGTAGCAGCCTCAGAAGCTCTGTGTTTCTTGC
CGGGAACGTGGCTGGCTGTCTGGATTTGAAGATGGTGCCTTCCCCCATAT
CTCTGTGATTCTCTCTCCCGTCTCTAAAATTTTTGCCCCTCTCGTTTTCC
TCCGGTCCCCTTCCTTCATTTTGCCCCTCCCTGTTTTCCTCGACCTTTAT
ATCCCCCTTCCCGTTTTCTCGTGTTTCTACACTTTTTTTTTTTCGCCCAT
TCCCC

Query= MSMg01no346_j10.b1 MSMg01no346_j10.b1 CHROMAT_FILE:
MSMg01no346_j10.b1 PHD_FILE: MSMg01no346_j10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:19 2005
         (459 letters)



>mm_chr4_7490292_7491150
          Length = 859

 Score =  849 bits (439), Expect = 0.0
 Identities = 454/459 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgtataaatatgatgctaaatagttgtaataatgttataattattatttgttagctgac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 atgtataaatatgatgctaaatagttgtaataatgttataattattatttgttagctgac 600

                                                                       
Query: 61  agctccttgtcaattttatagataagagtatctggtatggagttcacaatgcttggccct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 agctccttgtcaattttatagataagagtatctggtatggagttcacaatgcttggccct 540

                                                                       
Query: 121 catgggcttatgggattctatgaaacataataatagatgtacccagcagaaatgcaaccc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 catgggcttatgggattctatgaaacataataatagatgtacccagcagaaatgcaaccc 480

                                                                       
Query: 181 tagtaacccccactgatggaaaaattatgaaatgaatttggctgaagaatatgaagacaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tagtaacccccactgatggaaaaattatgaaatgaatttggctgaagaatatgaagacaa 420

                                                                       
Query: 241 gcagagttctcttatgactctacaacaaaaatgctaactaatagtagcttgagatggatc 300
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gcagagttctcttaggactctacaacaaaaatgctaactaatagtagcttgagatggatc 360

                                                                       
Query: 301 cagtttggagtaagagtcagttctgtcccagagcctcattcttctttgttgtggctcctg 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 359 cagtttggagtaagagtcagttctgtcccagagcctcattcttctttgttgtggctccag 300

                                                                       
Query: 361 ctaaaggaaaattgaaagtccgatggtgcctgcctgtctgcctgcctggtttttaccttt 420
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ttaaaggaaaattgaaagtccgatggtgcctgcctgtctgcctgcctggtttttaccttt 240

                                                  
Query: 421 cataatgctctaattttatctgcttttcttgctcttttt 459
           ||||||| | |||||||||||||||||||||||||||||
Sbjct: 239 cataatgttttaattttatctgcttttcttgctcttttt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space:   381201
Effective search space used:   381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)