XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCA
CCTGACGAATACTGAATGGCTGAGAAGCACCTGAAAAAATGTTCAGCATC
ATTAATCATCAGGGAAATGCAAATCAAAACAATCCTGTGGTTCCACCTCA
CACCAGTCAGAATGGTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGC
GAGGATGTGGAGAAAGAGGAACCCTCCTCCATTGTTGGTGGGATTGCAAG
TTTGTACAACCGCTCTGGAAATCAGTCTGGTGGATTCTCAGAAAATTGGA
CATAGTACTACTGAAGGATCCTGCAATACCTCTCCTGGGTATATATCCAG
AAGATGTTCCAACTGGTAAGAAGGACACATGCTCCACTATGTCATAGCAG
CCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTTAGCA
GAGGAATGGATAGAGAAAATGTGGTACATTTACACCATGGAGTACTCCTC
AGCTATTAAAAAGAATGAATTTATGAATTTCCTAGGCAAATGGATGGACC
TGGAGGGCATCATCCTGAGTGAGGTAACCCAATCACAAAAGTACTCATAT
GATATGTACTCACTGATAAGTGGATATCATCCCAGATACTTATAATACCC
TAGATACAACGCACCCCTGGTGAAATTCATGAAACTCCCGAGAAACGAAC
ATCAAGCGTACAACCTTTGCCCCTTCTTAA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXCTTTGCCATATACAATGTGTTTCTAAGTCATGGGG
ATTTGCCTTCCTCCATATTTCCTGTGTAATCTTCTATTGGATCCCCTGAG
GATTTAACCAAAGCCCTCCACCAGCTCCATCTCAGCAGCTTCACGATAGC
TTTCTCCATCCTTTATTAGTGAGAAATTGGTTGTTCTTACTGCCTTTTTT
TGGTCATACTTTTGCTTCTAAATAATCCATAGTTTCTTGCTTCCTACTAT
TCAGTTTTGTCACTCAGTCTTTCTCATCTGGTCACAAACTACAGACTGTT
TAGTGCCCAGTCTTCTCTTTTGTCTTTTTCTCTTCTTTGAACATGTTCTG
TATTGTGTCCTCTCCCTGAAATGTCCCTCTAATAGTGTCAACTGCTGTTG
AGTCATCTTTCAGTCACCTGAATTCTAGTCCAGTTGATTATTTCTTTTCA
TGGAGAGCTCAGGCTGGTGAGTACCATAGCACGCTATCTATCTTCTACTT
CTTGTCTGCCGGAGACAGAAGCAGACTATGCCCCTTATCTGGTGAACTGG
GCATAGGACCCACAAGAAATATCTTTATTCCTATTCTTATAGTCTGACCT
ATTTATCATTCTGTATGTACATATTCATTAAGCAACAAGAGCTGTGCATC
TTGCCCCTCTCATTAACAGCTTTAGACTC

Query= MSMg01no346_k02.g1 MSMg01no346_k02.g1 CHROMAT_FILE:
MSMg01no346_k02.g1 PHD_FILE: MSMg01no346_k02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:22 2005
         (497 letters)



>mm_chr4_64608042_64608938
          Length = 897

 Score =  837 bits (433), Expect = 0.0
 Identities = 478/507 (94%), Gaps = 23/507 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctttgccatatacaatgtgtttctaagtcatggggatttgccttcctccatatttcctgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttgccatatacaatgtgtttctaagtcatggggatttgccttcctccatatttcctgt 260

                                                                       
Query: 61  gtaatcttctattggatcccctgaggatttaaccaaagccctccaccagctccatctcag 120
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 gtaatcttctattggatcccctgaggatttaaccaaagcccttcaccagctccatctcag 320

                                                                       
Query: 121 cagcttcacgatagctttctccatcctttattagtgagaaattggttgttcttactgcct 180
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagcttcatgatagctttctccatcctttattagtgagaaattggttgttcttactgcct 380

                                                                       
Query: 181 ttttttggtcatacttttgcttctaaataatccatagtttcttgcttcctactattcagt 240
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttttagtcatacttttgcttctaaataatccatagtttcttgcttcctactattcagt 440

                                                                       
Query: 241 tttgtcactcagtctttctcatctggtcacaaactacagactgtttagtgcccagtcttc 300
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttgtcgctcagtctttctcatctggtcacaaactacagactgtttagtgcccagtcttc 500

                                                                       
Query: 301 tcttttgtctttttctcttct----------ttgaacatgttctgtattgtgtcctctcc 350
           |||||||||||||||||||||          |||||||||||||||||||||||||||||
Sbjct: 501 tcttttgtctttttctcttctgccatcttctttgaacatgttctgtattgtgtcctctcc 560

                                                                       
Query: 351 ctgaaatgtccctctaatagtgtcaactgctgttgagtcatctttcagtcacctgaattc 410
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgaaatgtccctctaagagtgtcaactgctgttgagtcatctttcagtcacctgaattc 620

                                                                       
Query: 411 tagtccagttgattatttcttttcatggagagctcaggctggtgagtaccatagcacgct 470
           ||             ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 621 ta-------------tttcttttcatggagagctcaggctggcgagtaccatagcacgct 667

                                      
Query: 471 atctatcttctacttcttgtctgccgg 497
           |||||||||||||||||||||||||||
Sbjct: 668 atctatcttctacttcttgtctgccgg 694


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space:   431969
Effective search space used:   431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)