Query= MSMg01no347_m08.b1 MSMg01no347_m08.b1 CHROMAT_FILE:
MSMg01no347_m08.b1 PHD_FILE: MSMg01no347_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:51 2005
(416 letters)
>mm_chr4_127970249_127971065
Length = 817
Score = 706 bits (365), Expect = 0.0
Identities = 401/413 (97%), Gaps = 1/413 (0%)
Strand = Plus / Plus
Query: 5 gaattcatcatttatattctgcttagaccttctgtggacagttgtcttgaactcagggaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatcatttatattctgcttagaccttctgtggacagttgtcttgaactcagggaa 264
Query: 65 ggggtgggctctactgatttcccccagcagacaatatgtgggaaccagccccctggccat 124
|||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 265 ggggtgggctcttctgatttcccccagcagacaatctgtgggaaccagccccctggccat 324
Query: 125 ggctcccagctctgcacctatccgcatttcccttgttttgggtagaaggcattgtcacag 184
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggctcctagctctgcacctatccgcatttcccttgttttgggtagaaggcattgtcacag 384
Query: 185 attttccttgttgtggggtaaggctgggttgggtcaggattacccttcattcttgaccgc 244
||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 385 attttccttgttgtggggtcaggctgggttgggtcaggattacccttcgttcttgaccgc 444
Query: 245 ctccctctcccaatagccaacatcaagtca-taccagtgtctggtctagactgacagtgc 303
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 445 ctccctctcccaatagccaacatcaagtcagtaccagtgtctggtctagactgacagtgc 504
Query: 304 aggtagcaagttctgaagacaccagggaagtgccttttgctgctacaattgttgtagtga 363
||||||||||||||||||||||| ||||| |||||||||||||| |||||| ||||||||
Sbjct: 505 aggtagcaagttctgaagacaccggggaaatgccttttgctgctgcaattggtgtagtga 564
Query: 364 actgaatctggagctaagtttgcttatttgctggagagctgggtaggtcttca 416
||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gctgaatctggacctaagtttgcttatttgctggagagctgggtaggtcttca 617
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 817
Length adjustment: 9
Effective length of query: 407
Effective length of database: 808
Effective search space: 328856
Effective search space used: 328856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no347_m08.g1 MSMg01no347_m08.g1 CHROMAT_FILE:
MSMg01no347_m08.g1 PHD_FILE: MSMg01no347_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:51 2005
(445 letters)
>mm_chr4_128061909_128062753
Length = 845
Score = 849 bits (439), Expect = 0.0
Identities = 442/443 (99%)
Strand = Plus / Minus
Query: 1 ttgctgaaccacagagtgaaggaaccacctctagagagatgtcagaataagccttggggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 ttgctgaaccacagagtgaaggaaccacctctagagagatgtcagaataagccttggggt 584
Query: 61 agaggctgtaacagtcagcttcctgctgatcgctagcccagtgtctgccacgtggtagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 agaggctgtaacagtcagcttcctgctgatcgctagcccagtgtctgccacgtggtagaa 524
Query: 121 tccgacaaacactggccagaagtatgcactactaactaaataactaactaacttacaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tccgacaaacactggccagaagtatgcactactaactaaataactaactaacttacaact 464
Query: 181 tagtacccttgctttaaactcggactcccaaagatttcatttgttccctaacaactgagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tagtacccttgctttaaactcggactcccaaagatttcatttgttccctaacaactgagg 404
Query: 241 aagcagcagaagctggggaggcaaacacatgtgtgtcactcccagaaagaagaaagcaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 aagcagcagaagctggggaggcaaacacatgtgtgtcactcccagaaagaagaaagcaat 344
Query: 301 gtgagagggggctgccatgctcagaatccaaagggcaaatgtgaggaagagggaccaaaa 360
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gtgagagggggccgccatgctcagaatccaaagggcaaatgtgaggaagagggaccaaaa 284
Query: 361 gtgtcctgggcttctttggttacaggagggggacaaagggtttcagaaacaccggagaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gtgtcctgggcttctttggttacaggagggggacaaagggtttcagaaacaccggagaga 224
Query: 421 tgctgctgagacaacaggttgac 443
|||||||||||||||||||||||
Sbjct: 223 tgctgctgagacaacaggttgac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
