TTACAACAAAATTTATTGGTTAGTGTCGAATTACCCCGCCCACCCCTATC
ACCCGGGAGAGACGCCGGAATAACGAAAGGAATCATAACTACTTAGAGCA
AGAGCATATACGAAAACAGGAGGGCTGGCGGCCCCTGCAAAGACAACCAG
GAATTATGATGGATAACACACACCTATGCCACGTACATTACCACGCAGAT
GAGAACTAAGTCAAGGCTGCTTGAATAGTAGAGAGATCACGACCGCGTAT
TAGTTCGCCCCCCCCTATGCACGGTGCGCTGGCGAGGAGACGCAAAGAAG
CACCATAAATAGTAAGCACGATAGCCCCGGATCTCGCCTGTACCTCACCT
ACGCGCCGTTATTGACCCCATGAACCTCCCACTCCCACTCGCCTGTTTAA
CCCCCCCGTGTAGTGAACATAGTTTGTTTATGTTTAAACCACGCAACGAC
ATTCGCGAAGCGTACTCAGTATCCACTTGTTAGAACACATGAGACGAGAA
AGCGCCGCGAACTGGCATCACCATGCCTGTCTCTCTTCTGTAAACTATGA
TTACTTCCCCGTTTTTTCACCACGCTGTTACAAAAATGTGTTCAAGCGAA
GATGTGAAGGAGAGAATCTAAGTCTCCGACACACAAGTCGAACGCGCTAT
TCCACGACAGATAGAGGAATCGAAAGAATTATGATGAAGATAATCGACGC
CAACGACGAGGATTACCGACGAGAGCATTGTAATCAGTAATAAACGAAGA
ACGAACATAATAAGAAGTACGACGTAGATAGGGCCGCACTCGACGGACGA
ACTCGTGATACAATGGACACATACAAATGAACTGTAGTGGAATATACGGT
GACGCGCTAACAAAAAAAATATACATCCATACATCAGAAGACAGAATACC
GACAAATAATACCGCACTATCGTATACCTATTGAACATCTACACACTTAT
AACGATAAAAATAACAAAGGCATTAATGATAGTCATACTCAGAAAGTCAA
TAACAGTTACTATTTATATCATTTATAATTTTGTATAAAGTGTAGACAGT
GTTATGCATTGAGCCGTAGATGCGCCGCTCCATGCGAAGTTAGAGAACCA
GATCGATCTAGATTAGTGTCCAGCGACGCAAGAAACACGCGGAAACTGTT
AACTACAN

CCAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAACAGGGAGGTGA
CCTATANAAGATTCGCGAAATTCAATGAGATGGAAATGCACATGGAGCTT
CCTGCTGGGTGCCTGGCACGTGCAATTGATTAGAATGGTCCTATGGAATG
TCAGGGCTGGAAGGGGCATGAAAGATGACCTAATCCTGGTGTCTGATTTC
ACAGGCAGGGTGAACTGAGCCCAAGGAGAGGAACCGACTTGTCCAAGGTC
ACATGGTAGAATCTTAGTGATACTGAATCTAGCACCTTGAGTTTATTTTT
GAAATCAAAGGTCAAAAACCTCTCACTAGACCTGCTTGCTCTTCCTGCGA
GCTGAGCAATTACCAACTTCCCAAGCTTCCCCCATTCTCTGGCCCCGTAA
GTCCAATTGAAACTTTGTTCTCTACTTAGTAAGCGAAATGCATAATTTGA
CCCTGAAAAAAAATACATAAAATTAAACCTGAAATCTCAGGCTTTAGCAT
AAAAGCTGTCTTTGAAGCATTTCCTCCCATCTTCCTTGCTCACTGCCCAC
CCCCCCGATTTTGCAATAACAGTAATGCTTCAAGGAAAGAAAAAATAAAA
ATCTGATGCACATAACAGATATTTCAGCCCAATAACGCATCACAGATGTT
CCTATCACCCTGTGCATGCATGCATACAATTCTACTGAAAGGCCAGTGTC
ATTTCTGACTTTCATGTTGGAGATTCCTAC

Query= MSMg01no349_m01.g1 MSMg01no349_m01.g1 CHROMAT_FILE:
MSMg01no349_m01.g1 PHD_FILE: MSMg01no349_m01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:28 2005
         (583 letters)



>mm_chr4_114083859_114084840
          Length = 982

 Score = 1091 bits (564), Expect = 0.0
 Identities = 570/572 (99%), Gaps = 1/572 (0%)
 Strand = Plus / Minus

                                                                       
Query: 12  tgcacatggagcttcctgctgggtgcctggcacgtgcaattgattagaatggtcctatgg 71
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982 tgcacatggagcttcctgctgggtgcctggcacgtgcaattgattagaatggtcctatgg 923

                                                                       
Query: 72  aatgtcagggctggaaggggcatgaaagatgacctaatcctggtgtctgatttcacaggc 131
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 aatgtcagggctggaaggggcatgaaagatgacctaatcctggtgtctgatttcacaggc 863

                                                                       
Query: 132 agggtgaactgagcccaaggagaggaaccgacttgtccaaggtcacatggtagaatctta 191
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 agggtgaactgagcccaaggagaggaaccgacttgtccaaggtcacatggtagaatctta 803

                                                                       
Query: 192 gtgatactgaatctagcaccttgagtttatttttgaaatcaaaggtcaaaaacctctcac 251
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 gtgatactgaatctagcaccttgagtttatttttgaaatcaaaggtcaaaaacctctcac 743

                                                                       
Query: 252 tagacctgcttgctcttcctgcgagctgagcaattaccaacttcccaagcttcccccatt 311
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 742 tagacctgcttgctcttcctgcgagctaagcaattaccaacttcccaagcttcccccatt 683

                                                                       
Query: 312 ctctggccccgtaagtccaattgaaactttgttctctacttagtaagcgaaatgcataat 371
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ctctggccccgtaagtccaattgaaactttgttctctacttagtaagcgaaatgcataat 623

                                                                       
Query: 372 ttgaccctgaaaaaaaatacataaaattaaacctgaaatctcaggctttagcataaaagc 431
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ttgaccctgaaaaaaaatacataaaattaaacctgaaatctcaggctttagcataaaagc 563

                                                                       
Query: 432 tgtctttgaagcatttcctcccatcttccttgctcactgcccacccccccgattttgcaa 491
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 562 tgtctttgaagcatttcctcccatcttccttgctcactgccca-ccccccgattttgcaa 504

                                                                       
Query: 492 taacagtaatgcttcaaggaaagaaaaaataaaaatctgatgcacataacagatatttca 551
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 taacagtaatgcttcaaggaaagaaaaaataaaaatctgatgcacataacagatatttca 444

                                           
Query: 552 gcccaataacgcatcacagatgttcctatcac 583
           ||||||||||||||||||||||||||||||||
Sbjct: 443 gcccaataacgcatcacagatgttcctatcac 412


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 982
Length adjustment: 10
Effective length of query: 573
Effective length of database: 972
Effective search space:   556956
Effective search space used:   556956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)