NNNNAAAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCGCGGAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTG
AAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAAC
CCTGAGATTCCACCTCACACCAGTCAGAATGTCTAAGATCAAAAATTCAG
GTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCAT
TGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCG
GTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTC
TCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGC
TCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGA
ACCCAGATGCCCTTCAACAGAGGAATGGATACAGAANATGTGGTACATCT
ACACAATGGAGTACTACTCAGCTGTTAAAAAGAATGAATTTATGAAATTC
CTAGCCCAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACA
TTCTCCAAGAACTTCCCCAATATGTACTCCCTGATAAGGGGATATTTGGC
CAAAACCCAGGATACCCAGAAAATAAAAACATTTTGTTAAAACCTGAACC
CCTAAAAAAGGAAAATGAGGGGGAGAACTTTGCCCCTCCCTTTAAAGGGG
AAAAAAA

NNNNNNNNCCAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTTCAATTGTTTGTA
GAAATGCTGTGGTCATTTGTTAGGAGATGGCAGTAATAGGTTCTGGGATG
ATTTGGGGTCTTGTACCTGGAAACTTTCTTGGACCTCAAGCTCAGATAGG
TAGCCCTGCCCTCTCTTTGGTAAGAACTCCTGTCTGTCGTTTCTTGGTAG
GTGGGAGTGGACTTCACCGGCTCCAATGGTGACCCCAGTTCTCCAGACTC
CCTGCATTACATCAGCCCGAATGGTGTTAATGAGTATCTGACTGCCATCT
GGTCTGTAGGATTGGTAATTCAAGATTATGATGCGTGAGTATGACTTTGA
GAATCCTGAAGTGCACATTTCATAATTCCTTCCAAAGGGCACTTTCTGTT
TTGTCAGCTAGTGTTCTAATAAAGGTGCAAGGATGGGAAGGATGGAACAG
CGTTTTCTCAGATTTCCTTCTCTGGTTATTTATCTCTGGGTTTCCCTTCC
ATCTCATCGATCTTGCTGTAACTAGATAAAATGTGCTGTGTATAGCTTCC
TCATTTATGGTTGAGAGAATTCAGCCAGAACCATGGTGGAACCGCTTTTC
CTACAGTTTTGACACTAAGGAAAATTTTTCCTGGGGGCGGAAACTCTAAA
GGGGTAAAACTTGTAAACGGCCCAATTGGTTTCCTAAAAAAACAAAAAGG
TCTTTTTTGGGAAGGAAAAGGAATTTAAGCAA

Query= MSMg01no351_c24.g1 MSMg01no351_c24.g1 CHROMAT_FILE:
MSMg01no351_c24.g1 PHD_FILE: MSMg01no351_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:22 2005
         (419 letters)



>mm_chr4_19459227_19460045
          Length = 819

 Score =  779 bits (403), Expect = 0.0
 Identities = 415/419 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agttcaattgtttgtagaaatgctgtggtcatttgttaggagatggcagtaataggttct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 agttcaattgtttgtagaaatgctgtggtcatttgttaggagatggcagtaataggttct 560

                                                                       
Query: 61  gggatgatttggggtcttgtacctggaaactttcttggacctcaagctcagataggtagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gggatgatttggggtcttgtacctggaaactttcttggacctcaagctcagataggtagc 500

                                                                       
Query: 121 cctgccctctctttggtaagaactcctgtctgtcgtttcttggtaggtgggagtggactt 180
           |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ccttttctctctttggtaagaactcctgtctgtcgtttcttggtaggtgggagtggactt 440

                                                                       
Query: 181 caccggctccaatggtgaccccagttctccagactccctgcattacatcagcccgaatgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 caccggctccaatggtgaccccagttctccagactccctgcattacatcagcccgaatgg 380

                                                                       
Query: 241 tgttaatgagtatctgactgccatctggtctgtaggattggtaattcaagattatgatgc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tgttaatgagtatctgactgccatctggtctgtaggattggtaattcaagattatgatgc 320

                                                                       
Query: 301 gtgagtatgactttgagaatcctgaagtgcacatttcataattccttccaaagggcactt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gtgagtatgactttgagaatcctgaagtgcacatttcataattccttccaaagggcactt 260

                                                                      
Query: 361 tctgttttgtcagctagtgttctaataaaggtgcaaggatgggaaggatggaacagcgt 419
           ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 259 tctgttttgtcagctagtgttctaatagaggtgcaaggatgggaaggatggaacagcgt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space:   332100
Effective search space used:   332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)