TTAAAAAACTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXCGCGGAATTCCTGATCTTTCCAAGACTTCTATCATGAATGGATGT
TGGATTTTGTCAAATGCTTTCTCAGCATGTAATGAGATGATCATGTGGGT
TTTTTATTCTTTGAGTTTGTTTATATAGTGGATTGCTTTGATGGATTTCC
GTATGTTGAACCATCTTTGCATCTCTGGGATGCAGCCTACATGATCTTGA
TGGATGATCATTTTGATGTGTTCTTGGATTCAGTTTGCAAGAATTTTATT
GAGTAATTTTGCATTAATATTCATCAGCAAAATTGGTCTGAAGTTCTCTT
TCTTTGTTGGGACTTTGTGTGGTTTAGGTATCAGAGTAATTGTGGCTTCA
TAGAATGAATTGGGTAGAGTACCTTCTGCCTCTATTTTGTGGATAGTTTG
AGGAGAACTGGAATTAGGTCTTCTTTGAAGGTCTGATAGAACTCTGCACT
AAACCCATCTGTTCCTGCGCTTTTTTTTTTTTTTGGTTGTGAAACTATTA
ATGACTGTTTCTATTTCTTTAGGGGATATGGGACTGTTTAGATCATTAAT
CTGATCTTGTTTTAACTTTGGTACCTGGTATCTGACTAGAAAATTGGCCC
ATTTCCCACAGGGTTTTCCAGTTTTGTTGAAGATAGGAATTTGGACTAAG
ACCTGAAGATTTTTTGGAATTCCTCAAAATTCTGCTGTAA

GTAAATTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACCTTTCTCCCCCCTTG
AAAGGATTTAACCACTATTGCTTTAGAGACTGAATTTTCTATTTTATTTT
AAATATGGAAAAAGATATTGTTAGTACTTGACTCTCACAACCCCACTGAT
AGCTTATCCAAAGTTCTTAGTAGCAAGCAATGGCAATATTTTTCCTTCCC
CATTCTCAAACGTTGTAAGTGCATCTCATCACTTTTTCCCTCCGTCTTTT
GGAGACAATGAATTACTACTTACCTGGCCCCTTTTCTTTCCAAGCTAATG
TCTACTTCTTCAATGTTCCTAGTTTTTTTTTTTTAATGTCTGTTTTTCTT
GCTTTTTATGAGCTCTTCAAGACTTGACATTCAAATTCCACACAAGCAAT
ATCCATCATTGTTCATTTGTTTGACTAGGATATTATGATGGTAGGAAATC
CATTTTAAATTTTATTTTGAGAAGACCAGCAATACTTCTCTGTGAGTAAC
GCACTTGGTTGCCAAGCCAGATAACCTGAGTTAAATCCTAGAAATCCACA
TAGCTGAAAAAGAGGAACAACTCCCAAAAGTTGTCCTGTGGGCTTCATCA
CACATGTGCGGATGGGTCCCCACCCCACCCCTAAATAAAAAAACCCAATT
CTTGGGGTTGCGTCATTCCAAAAAAAATTTTATTTATTTTTACTTGGGCG
AGGA

Query= MSMg01no351_o20.g1 MSMg01no351_o20.g1 CHROMAT_FILE:
MSMg01no351_o20.g1 PHD_FILE: MSMg01no351_o20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:17 2005
         (474 letters)



>mm_chr4_14677655_14678524
          Length = 870

 Score =  828 bits (428), Expect = 0.0
 Identities = 461/474 (97%), Gaps = 4/474 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   acctttctccccccttgaaaggatttaaccactattgctttagagactgaattttctatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acctttctccccccttgaaaggatttaaccactattgctttagagactgaattttctatt 260

                                                                       
Query: 61  ttattttaaatatggaaaaagatattgttagtacttgactctcacaaccccactgatagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttattttaaatatggaaaaagatattgttagtacttgactctcacaaccccactgatagc 320

                                                                       
Query: 121 ttatccaaagttcttagtagcaagcaatggcaatatttttccttccccattctcaaacgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttatccaaagttcttagtagcaagcaatggcaatatttttccttccccattctcaaacgt 380

                                                                       
Query: 181 tgtaagtgcatctcatcactttttccctccgtcttttggagacaatgaattactacttac 240
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 381 tgtaagtgcatctcatcactttttccctccgtcttttggagacaatggattactacttac 440

                                                                       
Query: 241 ctggccccttttctttccaagctaatgtctacttcttcaatgttcctagttttttttttt 300
           ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||   
Sbjct: 441 ctggccccttttctttccaagctaatgtctacttcttcaatattcctaatttttttt--- 497

                                                                       
Query: 301 taatgtctgtttttcttgctttttatgagctcttcaagacttgacattcaaattccacac 360
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 -aatgtctgtttttcttgctttttatgagctcttcaagacttgacattcaaattccacac 556

                                                                       
Query: 361 aagcaatatccatcattgttcatttgtttgactaggatattatgatggtaggaaatccat 420
           ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 557 aagcaatatccatcattgttcatttgtttgactaaaatattatgatggtaggaaatccat 616

                                                                 
Query: 421 tttaaattttattttgagaagaccagcaatacttctctgtgagtaacgcacttg 474
           ||||||||||||||||||||||||||||||||| |||  |||||||| ||||||
Sbjct: 617 tttaaattttattttgagaagaccagcaatactgctccatgagtaacacacttg 670


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 870
Length adjustment: 10
Effective length of query: 464
Effective length of database: 860
Effective search space:   399040
Effective search space used:   399040
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)