Query= MSMg01no353_e16.b1 MSMg01no353_e16.b1 CHROMAT_FILE:
MSMg01no353_e16.b1 PHD_FILE: MSMg01no353_e16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:07 2005
(414 letters)
>mm_chr4_111690814_111691628
Length = 815
Score = 745 bits (385), Expect = 0.0
Identities = 406/413 (98%), Gaps = 1/413 (0%)
Strand = Plus / Plus
Query: 1 aaaaagaatatgctattactaccttttattaaaaggaaaaacaacaataaagatatgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaaagaatatgctattactaccttttattaaaaggaaaaacaacaataaagatatgttt 260
Query: 61 gaactaggtgatacttaacagataatagagggttatatggtaagagattaaagtgaatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaactaggtgatacttaacagataatagagggttatatggtaagagattaaagtgaatga 320
Query: 121 agaagggtaataactatttaatgaaaaagaattaatcagaaatgaacaaaggtaggaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaagggtaataactatttaatgaaaaagaattaatcagaaatgaacaaaggtaggaatt 380
Query: 181 tcatagtgcaaaaagctcttttccagaaaaatgaagaaaaaatttatgcaagttattatg 240
||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 tcatagttcaaaaagctcttttccagaaaaatgaagaaagaatttatgcaagttattatg 440
Query: 241 aagtacatcaaatataaatataagttaaatgtatacattatgatatctttggggtgaact 300
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagtacatcaaatataaaaataagttaaatgtatacattatgatatctttggggtgaact 500
Query: 301 aaccgattataaataa-tggtgttttttcctttagtgtgttgagcatagagaggcagagg 359
|||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 aaccgattataaataaatggtgttttttcctttagtttgttgagcatagagaggcagagg 560
Query: 360 ggaagggagagaggaagaggaaggggaaggggaaggggaagaggaagaggaag 412
||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 561 ggaagggagagaggaaggggaaggggaaggggaaggagaagaggaagaggaag 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 815
Length adjustment: 9
Effective length of query: 405
Effective length of database: 806
Effective search space: 326430
Effective search space used: 326430
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no353_e16.g1 MSMg01no353_e16.g1 CHROMAT_FILE:
MSMg01no353_e16.g1 PHD_FILE: MSMg01no353_e16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:07 2005
(473 letters)
>mm_chr4_112347026_112347898
Length = 873
Score = 857 bits (443), Expect = 0.0
Identities = 464/471 (98%)
Strand = Plus / Minus
Query: 1 tcaaccttatcaagtttcatggcatggttcaccaccccacaggactaaggtaataatgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 tcaaccttatcaagtttcatggcatggttcaccaccccacaggactaaggtaataatgaa 785
Query: 61 ctgccatagttttgttttacttaggaaatggtattgaaaataaaattctgcttgtgtgaa 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 784 ctgccatagttttgttttacttaggaaaaggtattgaaaataaaattctgcttgtgtgaa 725
Query: 121 aagcaacagtaattattcagagtatatgtgcattttaaatattttattaaatactcttcg 180
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 724 aagcaacagtaattattcaaagtatatgtgcattttaaatattttattaaatactcttca 665
Query: 181 cactcttgtatatcctattgttttgaaacttccaaattgtaaggtatagaattataatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 cactcttgtatatcctattgttttgaaacttccaaattgtaaggtatagaattataatac 605
Query: 241 caatgtttcaacatattatgagaaacaagttgtttcagggaagcagtatagatatttaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 604 caatgtttcaacatattatgagaaacaagttgtttcagggaagcagtatagatatttcac 545
Query: 301 ctacaaatcaaacattagagttcaccaaaaattccaatataaactttacaaaagtgggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ctacaaatcaaacattagagttcaccaaaaattccaatataaactttacaaaagtgggaa 485
Query: 361 aaaaagaattaagtgaatgcaaaataatgaaataattattttcttggcagaagattggta 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 484 aaaaagaattaagtgaatgcaaaataatgaaataattattttcttggcagaagatttgta 425
Query: 421 caggaatgcttatgtgttttacagcatgtatatacatgtttcttttatttg 471
||||||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 424 caggaatgcttatgtgtcttacagcatgtatatacatgtttcctttatttg 374
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space: 399569
Effective search space used: 399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
