NCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCAGATTGTTCCGCTTACCAGAGGAAGACAAAGGCAAAGAGGAG
ACAGATATAAAATGGGAAAGGCACATAGACCTTAGCCATATTTTTTTCTA
ACTTTAGAATTCTCCAAGGACTGATCATTTTGATGTTGGTATTCTGAATG
TAGAAGGCATGGTGTTTTAGAATTTTCTGCCAAGTCTGATGTCATCTAAC
TGTCCAATGTAAACTATATGGAAAGAACAATGAACAGACAAGACTGATCA
GGATACTTATGCTGACTATCCTCATGATAGAGAGAAAGAGACAGACAGAC
AGACAGACAGACAGACAGACAGACAGACAGATAGACAGACAGACAGAGAG
ACAGAGATTCTATGAAAATTGTCAGGTGTGGGATATTCACCCCAGAAACA
GAAGAAGGCAATTATATGAAACTGAGGACCAGGTAACCAGCCATGTGGCA
TGACAGAGTAAAATATATGGATAATTAAGATATGAGCTAGTTAGGGAATA
GTGGCAAAGCCATTAGCCTCAGCATTTATTCACATACAAGAATTCTCAGA
GTCAATATTTCTGGGAACAAATTGAGCAGGTGGAAAAACATGAAGTTACA
GAGAGATTTTACTACAAACCTTCCAATTCTAGAGAAAGAATTTGAATCAT
GTCTAGACCAAAAGAGATGAGGATGAAATAAAATGTTACTTACTGTGAAG
AACAAG

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGTTCTGTACCCCCC
CTTTTTTTTTAAACAGGGTAATTTGTTTCTCTGGAGTCTGACTTCTTGAG
TTCTTTGTATATATTGGATATTATCCCTCTATCAGATAATAGCGTTGGTG
AAGAGCCTTCCCAATATATTTGTGGTGTTTTTGTCTTCTTGACATTGTCC
TTTGCCTTACAGAAGCTTTGCAATTTTATGAGGTCCCATTTGGTGATTCT
TGATCTTACATCACAAGTCATTGGTGTTCTGTTCAGGAATTTTTCCCTTG
TGCCCATATGTTCAAGGCTCTTCCCCACTTTCTCTTCTATAAGTTTCAAT
GTATTGGGTTTATGTGAAGGTCCTTGATACACTTGGACTTGACCTTTATA
CAAGGAGATATGAATGGGTTGATTTGCCTTCTTCTACATGCTAACAGCCA
GTTGAACTAGCACCATTTGTTGATAATGCTGTCTTTTTTTTCCACTGGAA
GATTTTAGCTCCTTCGTCCAAGATCTAGCGACCTTCAGTGTGTGGTCTTC
TTCTTGGGTTTTCCATTCTGTAACTATTGCATTACTTGGTTTGCATCCCC
TTACTTTCCTGTTTTTTAACCCCTTTCTCTTTTTTTTTCCCCCCTCTATA
TTTTCCCCCCTTTTTTCCCCTCTTTTTCCCCTATTTTCCCCTTGTCTTTT
TCCTTCTTTTCCC

Query= MSMg01no354_m15.b1 MSMg01no354_m15.b1 CHROMAT_FILE:
MSMg01no354_m15.b1 PHD_FILE: MSMg01no354_m15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:03 2005
         (569 letters)



>mm_chr4_92160691_92161659
          Length = 969

 Score =  833 bits (431), Expect = 0.0
 Identities = 454/469 (96%), Gaps = 12/469 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   agaggaagacaaaggcaaagaggagacagatataaaatgggaaaggcacatagaccttag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 agaggaagacaaaggcaaagaggagacagatataaaatgggaaaggcacatagaccttag 398

                                                                       
Query: 61  ccatatttttttctaactttagaattctccaaggactgatcattttgatgttggtattct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ccatatttttttctaactttagaattctccaaggactgatcattttgatgttggtattct 338

                                                                       
Query: 121 gaatgtagaaggcatggtgttttagaattttctgccaagtctgatgtcatctaactgtcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gaatgtagaaggcatggtgttttagaattttctgccaagtctgatgtcatctaactgtcc 278

                                                                       
Query: 181 aatgtaaactatatggaaagaacaatgaacagacaagactgatcaggatacttatgctga 240
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 277 aatgtaaactatatggaaagaacaatgaacagacaagacggatcaggatacttatgctga 218

                                                                       
Query: 241 ctatcctcatgatagagagaaagagacagacagacagacagacagacagacagacagaca 300
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||      
Sbjct: 217 ctatcctcatgagagagagaaagagacagacagacagacagacagacagacaga------ 164

                                                                       
Query: 301 gacagatagacagacagacagagagacagagattctatgaaaattgtcaggtgtgggata 360
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 ------tagacagacagacagagagacagagattctatgaaaattgtcaggtgtgggata 110

                                                                       
Query: 361 ttcaccccagaaacagaagaaggcaattatatgaaactgaggaccaggtaaccagccatg 420
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 109 ttcaccccagaaacagaagaaggcaattatatgagactgaggaccaggtaaccagccatg 50

                                                            
Query: 421 tggcatgacagagtaaaatatatggataattaagatatgagctagttag 469
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49  tggcatgacagagtaaaatatatggataattaagatatgagctagttag 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space:   536081
Effective search space used:   536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)