Query= MSMg01no355_a03.b1 MSMg01no355_a03.b1 CHROMAT_FILE:
MSMg01no355_a03.b1 PHD_FILE: MSMg01no355_a03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:20 2005
(608 letters)
>mm_chr4_25707506_25708514
Length = 1009
Score = 795 bits (411), Expect = 0.0
Identities = 432/439 (98%), Gaps = 3/439 (0%)
Strand = Plus / Minus
Query: 5 gaattcctgtaaactgatgttcaggaactatgctttaagtagcaaggatctgataaacta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gaattcctgtaaactgatgttcaggaactatgctttaagtagcaaggatctgataaacta 379
Query: 65 t-aagcaaaatcatctagttcagtggtccttaagcaagactttgagtctctagagcattt 123
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 378 taaagcaaaatcatctagttcagtggtccttaagcaagactttgagtctctagagaattt 319
Query: 124 aaccagaggatttattattcaacaattcataagacactcatatgtacataaatatgagta 183
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 318 aaccagaggatttattattcaacaattcataagacactcatatgtacagaaatatgagta 259
Query: 184 tttttctggagtagaacttttaatttttagattctttgagaagcttatggctaattgttt 243
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tttttctggaatagaaattttaatttttagattctttgagaagcttatggctaattgttt 199
Query: 244 ttaaaaatttctttatttcatatatgtgagtacaccatctctgtcttcagacataccaga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 ttaaaaatttctttatttcatatatgtgagtacaccatctctgtcttcagacataccaga 139
Query: 304 atagggcattggataccattactgatggttgtgagccaccatgtggttactgggaattga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 atagggcattggataccattactgatggttgtgagccaccatgtggttactgggaattga 79
Query: 364 acttatgacctctggaaga-acagtcagggctcttaactgctgagccatctctccagccc 422
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 78 acttatgacctctggaagaga-agtcagggctcttaactgctgagccatctctccagccc 20
Query: 423 ccttgtgacctaatttatg 441
|||||||||||||||||||
Sbjct: 19 ccttgtgacctaatttatg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1009
Length adjustment: 10
Effective length of query: 598
Effective length of database: 999
Effective search space: 597402
Effective search space used: 597402
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_a03.g1 MSMg01no355_a03.g1 CHROMAT_FILE:
MSMg01no355_a03.g1 PHD_FILE: MSMg01no355_a03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:20 2005
(459 letters)
>mm_chr4_25535928_25536786
Length = 859
Score = 880 bits (455), Expect = 0.0
Identities = 458/459 (99%)
Strand = Plus / Plus
Query: 1 agaccgaggtagggagttgtagaaaataaaagaatggagaaaacatcaagccaggtcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaccgaggtagggagttgtagaaaataaaagaatggagaaaacatcaagccaggtcttg 260
Query: 61 aaagttaggatcagaacagaaaaaagattttcctgatccccacgcacagaagtccagtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaagttaggatcagaacagaaaaaagattttcctgatccccacgcacagaagtccagtta 320
Query: 121 ttaaacagtttacttgcattgttggacatgttaaaacaatgcgtacaacaatctctctgt 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 ttaaacagtttacttgcattgttggacatgttaaaacaatgcttacaacaatctctctgt 380
Query: 181 gtacactgggtttggtgtttggtttgagatgtataatgaatatgtgacctggtaagtata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtacactgggtttggtgtttggtttgagatgtataatgaatatgtgacctggtaagtata 440
Query: 241 cttatttaaacattttaattcaatgtctgcaaatctagttttgcatgtgagtgaaaataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttatttaaacattttaattcaatgtctgcaaatctagttttgcatgtgagtgaaaataa 500
Query: 301 attctgagggaataaaatggagtacaaacattgtacagaaccaaaaaggttgtgcattta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attctgagggaataaaatggagtacaaacattgtacagaaccaaaaaggttgtgcattta 560
Query: 361 aattgaattcttttattttaaatattcacattacaggaatgcattaggcccaaatagaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aattgaattcttttattttaaatattcacattacaggaatgcattaggcccaaatagaac 620
Query: 421 ataattatttacacattcactagctccagtgttttatca 459
|||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ataattatttacacattcactagctccagtgttttatca 659
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
