TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTCAACTATGGCATACTGAACTGCTGAGAAGCACTGGGAAAAATGTTCA
ACATATTTTTTTTCCCAAGACAGGGTTTCTCTGTAGCCCTGGCTGTCCTG
GATCTCACTCTGTAGACCAGGCTAGCCTCAAACTCAGAAATCTGCCTGCC
TCTGCCTCCCAAATGCTGGGATTAATGGCATGAGCCACCACTACCCAGCA
TCAACATCCTTAATCATCAGGGAAACGCAAATCAAAACAACCCTCAGATT
CCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCA
GATGCTGGAAAGGATGTGGTGAAAGAAAAACACTTCTCCATTGCTGGTGG
GATTGCAAGCTTGTACAACCACCGGAAATCAGTCTGGCAGTTCCTCAAAA
AATTGGACATGGCAACATGGGTTACATGAAACAAATAAGTATATGTAAGA
TTTAAGAATAAAAGGAAATTGTAGGAAACTAATGTGAGCTATTTCATGGG
GAACCTTTATAGCAGATGTCAGTTATAAAGTATATCTACAAAAATGAAAA
GTGTCCACACTTTGGTCTTCATTATTCTTGAGGTTCATGTGGTTAACAAA
TTGTATCTTATATCTTTGGTATCCTAAGTTTTTGGGCTAAAATTCACTTA
TCAGCGAGAACCTATTGTGTGAGTTCCTTTGTGATTGTGTTACCCCCCTC
C

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXATTATCTACCTGTTTACCTGAAACTGGACT
GAGCAACAAAAGGGATTATAGTCACGATATTGTTGACTTCTGAATCAACC
ATAGTTTAGGCTGTAGAGTTAGATCTTCAAAAACAGAATGCAAAGTAGGC
CCCAGGGAATGTTAAGATGCTGTCACTTCCCACTAGCATAATAGATGGAG
TAGTATGTGACACTTCTTAAGAGTCTCAGATTATTCAAGTGCCCCAAAGG
GCTTTGTTCTTTCAAGCTGAATTTACTTTCTTCTCAGTAATGATATTTAT
TAAAATAAACTCACAATCCCAAGTCCAAGATATGTCTGCAATCTGTGCTT
ATGTTGATCTTTCTTTGAATTCATGTGACTTGTCATTATACTTTGAATCA
TGATGCATAGTATTATCGAGGAAAAAAAGATTACATGTAAGTCTAAACCA
GTGACTATTCTAAATAAAACACAATAAAGTTGCTGGCTGTCTTGCAAGTA
CATTTTTGTATAAAGCAAACAATACCTTAGGATATTGAATAGTTTTATTA
CTTATTTTTTTGGCAATAAAAAGGAATTCTTAATTGAGGGAGAAATACAT
CCCCTTTTTTCTTTTTTCTTGCCCCCCCGGCCTCCCCCCCCCTAATTTTC
CCCCCTCCCAAAACCCCCCCCCGGCAGAAAAGGCCCTTCCCCTTTTTTTT
AATCTTAACTTTCCCCCCCTCCCCCCCCCGC

Query= MSMg01no357_e21.g1 MSMg01no357_e21.g1 CHROMAT_FILE:
MSMg01no357_e21.g1 PHD_FILE: MSMg01no357_e21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:16 2005
         (462 letters)



>mm_chr4_89580515_89581376
          Length = 862

 Score =  878 bits (454), Expect = 0.0
 Identities = 460/462 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   attatctacctgtttacctgaaactggactgagcaacaaaagggattatagtcacgatat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 attatctacctgtttacctgaaactggactgagcaacaaaagggattatagtcacaatat 260

                                                                       
Query: 61  tgttgacttctgaatcaaccatagtttaggctgtagagttagatcttcaaaaacagaatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgttgacttctgaatcaaccatagtttaggctgtagagttagatcttcaaaaacagaatg 320

                                                                       
Query: 121 caaagtaggccccagggaatgttaagatgctgtcacttcccactagcataatagatggag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaagtaggccccagggaatgttaagatgctgtcacttcccactagcataatagatggag 380

                                                                       
Query: 181 tagtatgtgacacttcttaagagtctcagattattcaagtgccccaaagggctttgttct 240
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 tagtatgtgacacttcttaagagtctcagattattcaagtgccccaaaaggctttgttct 440

                                                                       
Query: 241 ttcaagctgaatttactttcttctcagtaatgatatttattaaaataaactcacaatccc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcaagctgaatttactttcttctcagtaatgatatttattaaaataaactcacaatccc 500

                                                                       
Query: 301 aagtccaagatatgtctgcaatctgtgcttatgttgatctttctttgaattcatgtgact 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagtccaagatatgtctgcaatctgtgcttatgttgatctttctttgaattcatgtgact 560

                                                                       
Query: 361 tgtcattatactttgaatcatgatgcatagtattatcgaggaaaaaaagattacatgtaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtcattatactttgaatcatgatgcatagtattatcgaggaaaaaaagattacatgtaa 620

                                                     
Query: 421 gtctaaaccagtgactattctaaataaaacacaataaagttg 462
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtctaaaccagtgactattctaaataaaacacaataaagttg 662


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space:   385104
Effective search space used:   385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)