Query= MSMg01no359_d22.b1 MSMg01no359_d22.b1 CHROMAT_FILE:
MSMg01no359_d22.b1 PHD_FILE: MSMg01no359_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:42 2005
(411 letters)
>mm_chr4_116678863_116679672
Length = 810
Score = 625 bits (323), Expect = 0.0
Identities = 338/343 (98%), Gaps = 1/343 (0%)
Strand = Plus / Minus
Query: 69 tgggccagattttaaagaagtaatttgattaatttggtgatttcgcacttttatcccaaa 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tgggccagattttaaagaagtaatttgattaatttggtgatttcgcacttttatcccaaa 551
Query: 129 ccacgtttcagacagttgattttttccccttttttaagattggaaaatacgattttgagg 188
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 550 ccacgtttcagacagttga-tttttccccttttttaagattggaaaatatgattttgagg 492
Query: 189 tcatattttactcattcatcaagtatttactcagtgcctatagctgatgcctgcttagaa 248
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 491 tcatattttactcattcatcaagtatttactcagtgcctatagctgatgcctgcttggaa 432
Query: 249 tgactcccacttcagtctccttcccttggacagctttaggctcttgggatctatctgaac 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tgactcccacttcagtctccttcccttggacagctttaggctcttgggatctatctgaac 372
Query: 309 aaagctaggacccagcctctgtagagctgacattctagcaggcctagcagcctaaattat 368
|| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aaggcttggacccagcctctgtagagctgacattctagcaggcctagcagcctaaattat 312
Query: 369 aaagaagtttaaatgttggatggtggttgataagttatttctc 411
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aaagaagtttaaatgttggatggtggttgataagttatttctc 269
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 810
Length adjustment: 9
Effective length of query: 402
Effective length of database: 801
Effective search space: 322002
Effective search space used: 322002
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_d22.g1 MSMg01no359_d22.g1 CHROMAT_FILE:
MSMg01no359_d22.g1 PHD_FILE: MSMg01no359_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:42 2005
(125 letters)
>mm_chr4_116477648_116478172
Length = 525
Score = 211 bits (109), Expect = 1e-59
Identities = 112/113 (99%), Gaps = 1/113 (0%)
Strand = Plus / Plus
Query: 1 cagggcaagatgtgggctgccagctgcccgctgcttcccattctcccgctcactgcaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagggcaagatgtgggctgccagctgcccgctgcttcccattctcccgctcactgcaaca 260
Query: 61 gcgcaagaaggtattgcttcactagcatataagttccaccagaacacgggggg 113
|||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 gcgcaagaaggtattgcttcactagcatataagttccaccagaaca-gggggg 312
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 125
Length of database: 525
Length adjustment: 8
Effective length of query: 117
Effective length of database: 517
Effective search space: 60489
Effective search space used: 60489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
