XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
TTGCTATTGACCAGACACTCTTTGTTTAAGTAGTGAAAGAACTTTGTTGG
AATCTAACCTCAATATGGACAGCAGTGACATTTCTTATTTCTTCCAGCTA
GGCAGCTATGACTCTTTTCTGGGAACTGTGGACTCTCTGGTGTTTGTAAA
GTTTTGGCTTCAGCCAAGGGTAGATAGACGTTGATACAGCTTTAAGAGTT
CCCTTCTTTGGGTCCTGTGTCTGAGCTTTCCCACCAACTATGATGTTCTT
TAGCACCTCCCAAATCTACAGTCTCGGATCAGAGTATGTGCTCATTGTGG
GACAAAAGACAGGAGATCAAGTCCTACTGCATGTCCTGTGACCATGTCAC
TCTCTAATAATAAAACAATCTCCGCATTTCTCAGTATTACATGGAGTCTC
ATCCTTTCCACAGCCTTCTCTTAGTGTAAAAGAAAAAAACCCTACACTAT
CTCACACACACCCGGCAAATAAATCTTAACCACTATTCACATGCATCATT
TCATCCTGTGTATTATGATTACTATACCTTTTCGACCTGATTGACTCTAC
CTCTTGTCCTACCCCTATTATTTTCTATTATAGGCTCCATTGCCTTTTTC
TCCTTTTTATTCTCCATTCTTCTCTATTTGTTTTTGCTCATTTGCCTTTA
TACCCTCCTTCTATATCTCCCCTTTTTCTTCCTTCCTTCCTTCCTCTTCA
ACTATATTTTCACCTTTCTGTCTTTCCATTCTTTCTCTCTTTCTTTTCTG

AGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTTTCAGAGCCATCTCCCTAATGTCACACAACA
GTTAGAAAGCATCCTATTCCATCTCTGACACCTGTGATCCGCTGTCCCTC
CATGTTCAGTTTGCAGTTAATTTTTCAGCAGTTTTTTTAATATTTATTTT
ATTTATGTATGTATGTATTTATTTAATGTATGTGAGTACACTGTGGCTGT
CTTCAGACATACCAGAAGAGGACATCGAATCCCATTACAGACGGTTATTA
GCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGAAAGAGCAGT
CAGTGCTCTTAACCATTGAGCCATCTCTCCAGCCCTGCAGTTAATTTTTT
ATTCCTTTTCTTTCAATGTAGAGGTGTGCTTTTCTTTGTACTGTATATTT
CCCATCAGCACATAAATACCACACCTCTGCCATCTTGAAGTGAATACTTC
TCCCAGTTCTGCCCACCCACCTCTAGCAGTCGCTACATCTTCAAACCCAA
GAAACAAACCTATTCCCTTCTCTTCTTCTGAGGGTTACTCAGCTCCATAC
CTTTATCTCTTCTGTGGGTGTTGACAGCACCTTTCTCCCATGCTAAATCT
TCTGCTCCCTTTTTTTTATTCAGCAACCAATTCTTGGTTATACCCCCAAC
TTATCTTTTTTGGTGCGCCACACTTGTTTACTTCTCATAGGGCATATTCT
AAATTTGTCCCCACCCCCCCCCCTTATACAAGGATTCGTATATTN

Query= MSMg01no362_j05.g1 MSMg01no362_j05.g1 CHROMAT_FILE:
MSMg01no362_j05.g1 PHD_FILE: MSMg01no362_j05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:00 2005
         (464 letters)



>mm_chr4_5708822_5709685
          Length = 864

 Score =  837 bits (433), Expect = 0.0
 Identities = 458/469 (97%), Gaps = 5/469 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttcagagccatctccctaatgtcacacaacagttagaaagcatcctattccatctctga 60
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 196 tttcagagccatctccctaatgtcacacaacagttagaaagcatcttattccatctctga 255

                                                                       
Query: 61  cacctgtgatccgctgtccctccatgttcagtttgcagttaatttttcagcagttttttt 120
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 cacctgtgacccgctgtccctccatgttcagtttgcagttaatttttcagcagttttttt 315

                                                                       
Query: 121 aatatttattttattt-----atgtatgtatgtatttatttaatgtatgtgagtacactg 175
           ||||||||||||||||     |||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aatatttattttattttatttatgtatgtatgtatttatttaatgtatgtgagtacactg 375

                                                                       
Query: 176 tggctgtcttcagacataccagaagaggacatcgaatcccattacagacggttattagcc 235
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 376 tggctgtcttcagacataccagaagagcacatcgaatcccattacagacggttattagcc 435

                                                                       
Query: 236 accatgtggttgctgggaattgaactcaggacctctgaaagagcagtcagtgctcttaac 295
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 accatgtggttgctgggaattgaactcaggacctctgaaagagcagtcagtgctcttaac 495

                                                                       
Query: 296 cattgagccatctctccagccctgcagttaattttttattccttttctttcaatgtagag 355
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 496 cattgagccatctctccagccctgcagttaattttttattccttttctttcaatatagag 555

                                                                       
Query: 356 gtgtgcttttctttgtactgtatatttcccatcagcacataaataccacacctctgccat 415
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 556 gtgtgcttttctttgtactgtatatttcccatcagcatataaataccacacctctgccat 615

                                                            
Query: 416 cttgaagtgaatacttctcccagttctgcccacccacctctagcagtcg 464
           ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 616 cttgaagtgaatacttctcccagctctgcccacccacctctagcagtcg 664


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space:   387716
Effective search space used:   387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)