TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTCACCTGAGTACTACCGAATGGCAGAGAAGCACCTGAAAAAATGCTCAA
CATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCAC
CTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATG
CTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATT
GCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAA
CTGGATATAGTACTACCGGAGGATCCTGCAATACCTCTCCTGGGCATATA
TCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCACTATGTTCA
TAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAGGAACCCAGATGCCCC
TCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGGAGTA
CTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAATGGA
TGGACCTGGAGGGCATCATCCTTGAGCGAGGTAACCCATTCACAAAGGAA
CTCACACCATATGTACCCACTGATAAGGGGATATTAGGCCATAACTTAAT
ATACCTCAGATATTAGATATCCTTTTTCTAAAATCTTGGAATTCTCGAAA
AATCGACACCGGAATTGTGGAACCTTATGCCCCCTCCTCTTAAAGTTGCT
AAATA

NNCCCTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGCATGAACTGTTGCTTG
AAAACAGAGTGAGGGCAGTTGGCTTTCTTGGTCCCAAAGAGCCTGTTAAA
TGCTGCCTGGAATAGTCATGAGTGGGGAAGGCCAAACTGCTCCCCCAACA
ACCCCTCCCATCCCAATCCTCCTCCCTTTCAAACTTTATCTGTCAACAAG
GCCAACTAGTCCAGCAACTAATACTGAAATTGATTTGTTCAAACAGGCTA
GGCAAGACCCCATAATTACTGGAATTTTTAATCAACTCACGAAAGTTCAG
TTGCCATTCAATTTGTACTGGGCCTTGATGCTGCCACGAAGGGAAGGACT
GTATTGCACTAAGAATGAAAGGGATCAATAGGTCCTGACTATGGAATAGC
AGCTGTAGTCCCCACCAGGGTCCTCCAGCCTTACGGTAGAAATGTCAGAG
CATTCCCCAATTCCTGGGAGAGGTCCATGCACAAAACCAAATCCCCATCC
CATGCAGACACCACAAACAGTTTCTATTCTCTTCAGGTTTCAAGCTGTGG
GCAAATGTGTCCATGTTCTGGTTGTCCTTGTCTTCCTAAAGAAACCTACA
TGCCTTATATTACAGTTCCTATGGTACCTGTTTTGTGCATCTCTTTCCTG
ACCTTTGACATTATAGGATTCCGGAAAAAGAGGGGAATGAAGTGGATTAA
AAAACC

Query= MSMg01no363_k06.g1 MSMg01no363_k06.g1 CHROMAT_FILE:
MSMg01no363_k06.g1 PHD_FILE: MSMg01no363_k06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:25 2005
         (518 letters)



>mm_chr4_65421696_65422613
          Length = 918

 Score =  978 bits (506), Expect = 0.0
 Identities = 515/518 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcatgaactgttgcttgaaaacagagtgagggcagttggctttcttggtcccaaagagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcatgaactgttgcttgaaaacagagtgagggcagttggctttcttggtcccaaagagc 260

                                                                       
Query: 61  ctgttaaatgctgcctggaatagtcatgagtggggaaggccaaactgctcccccaacaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgttaaatgctgcctggaatagtcatgagtggggaaggccaaactgctcccccaacaac 320

                                                                       
Query: 121 ccctcccatcccaatcctcctccctttcaaactttatctgtcaacaaggccaactagtcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccctcccatcccaatcctcctccctttcaaactttatctgtcaacaaggccaactagtcc 380

                                                                       
Query: 181 agcaactaatactgaaattgatttgttcaaacaggctaggcaagaccccataattactgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcaactaatactgaaattgatttgttcaaacaggctaggcaagaccccataattactgg 440

                                                                       
Query: 241 aatttttaatcaactcacgaaagttcagttgccattcaatttgtactgggccttgatgct 300
           || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagttttaatcaactcacgcaagttcagttgccattcaatttgtactgggccttgatgct 500

                                                                       
Query: 301 gccacgaagggaaggactgtattgcactaagaatgaaagggatcaataggtcctgactat 360
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 501 gccacgaagggaaggactgtattgtactaagaatgaaagggatcaataggtcctgactat 560

                                                                       
Query: 361 ggaatagcagctgtagtccccaccagggtcctccagccttacggtagaaatgtcagagca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggaatagcagctgtagtccccaccagggtcctccagccttacggtagaaatgtcagagca 620

                                                                       
Query: 421 ttccccaattcctgggagaggtccatgcacaaaaccaaatccccatcccatgcagacacc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttccccaattcctgggagaggtccatgcacaaaaccaaatccccatcccatgcagacacc 680

                                                 
Query: 481 acaaacagtttctattctcttcaggtttcaagctgtgg 518
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acaaacagtttctattctcttcaggtttcaagctgtgg 718


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space:   461264
Effective search space used:   461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)