XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
GCTGGGCTTACTTTTCACATAGCACAACGTGCCCATGGTCACCGTGCCTT
TACAACAGCATGGTGACAGGAAACCTGAGAACACTGGACTCTGTACTGAC
TGCTCTGACAAAGAGCACAACAGGTCCTGTGGTTCCAGGATTGGTTTGAC
TCAGGAGCCCAAGTCTCATCAGAAGCCTGGTTTCTTTCTATCACTTGAGT
CTGCAGCTCCTGTCTTCCTTGGCTACCCACTGCCACAGGAGAACATTTTG
CCAAGGGGTCCCCACTTCTTTCTAGCTGGATCACCCTCAGTCCCACGCCA
GCCTCGGAAGCAGCAGCCAGAACAGAGAGGCCTATGCTGGCTGCCCCACC
AGGCCTTCCAGAGCATGTATTGCAAAGCAGAGGGGCTTCGTGTTCATGGG
TCAGCTTAGGGTAGCAATGCCTTTACGGCCTAGTTGAGATATCCGTGTTG
ACTCAGGGTTGGCGTTTGTGATTTCGGACTTTGAGAAAAGTATCCTTACA
GGTGTGTACTCACCTACTGTCTCAGGAAGGGTCAGGGACTTGTCACTGGA
TGTCAGGACCCAGTCAGGAATGCTCTCTCTGCTCTCAACACTGTATGCTC
GCCTTTTTAATTCCGTGCCTTTGTCTAAAACGGGACACGGCTGTTGAGGC
CAGAAAGTCCGTCCTCACTGCTGTGTGGAAAGCAAGAAAGGTTGCCTGGG

NNNNAACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGTTTCCTCCGAAGTCG
CTCAACAAGTAGGTGCACCAGCGCACTACACGGCAGGGCCCCAGCGGATC
CTGTAAGTGGTATTGACCCACTCTCTTGTGAGGTAAAGGTCTCATCTTGA
AGAACCAGTGGAAAGGACCTTTAAGTAGAGGCTGGTGATTTCCGGGTTGC
TCAGTACCTCCTTGAAAGGGATGCTGGCACAGTCGGACACTCTGTCCCCA
CTAAAAACCATTCATTTAAATACCGTTAAGATACATGGAATCAGAGCCCA
CTGTCATAAGCTATGTAGGGAGTCTGGGAGTTTTAACTCCAGCAGGAGGG
AGACACAGGGCATGTGCTCAGTATTACTAAAAATTCGGTACATCGCAAAA
CACCTAACAGCCTTCAGAGACTGGTTGGCTTGCTATAAAAGAATTATTTG
ACTAGGGACTCCAGGAAGCTAATGGCTACTAACTTAAGCATCATTCAGTA
ACATTAAGAACAAACACGGCCATAATTTGGCCGGGTTGGACTGTGTGCCG
GTTTCATAGGCTGCAAAGGAGGCTCATTAACTTGTTACGCTTTGGAAGGG
GGGGAAACTGGTANTGGAGGCCATTGTTACCTAGGAAACAGGGTCCCCAC
CCATCCTGAATATGGATGAAAGGGGGAATTTCTGGGGGAGAAAGGGGTTT
TTCTCCTCCCC

Query= MSMg01no363_l07.b1 MSMg01no363_l07.b1 CHROMAT_FILE:
MSMg01no363_l07.b1 PHD_FILE: MSMg01no363_l07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:30 2005
         (513 letters)



>mm_chr4_153361315_153362227
          Length = 913

 Score =  922 bits (477), Expect = 0.0
 Identities = 504/513 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   cacatagcacaacgtgcccatggtcaccgtgcctttacaacagcatggtgacaggaaacc 60
           |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 cacatagcaccacgtgcccatggtcaccgtgcctttacaacagcatggtgacagaaaacc 260

                                                                       
Query: 61  tgagaacactggactctgtactgactgctctgacaaagagcacaacaggtcctgtggttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgagaacactggactctgtactgactgctctgacaaagagcacaacaggtcctgtggttc 320

                                                                       
Query: 121 caggattggtttgactcaggagcccaagtctcatcagaagcctggtttctttctatcact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caggattggtttgactcaggagcccaagtctcatcagaagcctggtttctttctatcact 380

                                                                       
Query: 181 tgagtctgcagctcctgtcttccttggctacccactgccacaggagaacattttgccaag 240
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 tgagtctgcagctcctgtcttccttggctacccactggcacaggagaacattttgccaag 440

                                                                       
Query: 241 gggtccccacttctttctagctggatcaccctcagtcccacgccagcctcggaagcagca 300
           |||||||||||||  || |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 441 gggtccccacttcagtccagctggatcaccctcagtcccatgccagcctcggaagcagca 500

                                                                       
Query: 301 gccagaacagagaggcctatgctggctgccccaccaggccttccagagcatgtattgcaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gccagaacagagaggcctatgctggctgccccaccaggccttccagagcatgtattgcaa 560

                                                                       
Query: 361 agcagaggggcttcgtgttcatgggtcagcttagggtagcaatgcctttacggcctagtt 420
           ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 561 agcagaggggcttcgtgttcatgggtcagcttagggtagcaatgcctctgcggcctagtt 620

                                                                       
Query: 421 gagatatccgtgttgactcagggttggcgtttgtgatttcggactttgagaaaagtatcc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagatatccgtgttgactcagggttggcgtttgtgatttcggactttgagaaaagtatcc 680

                                            
Query: 481 ttacaggtgtgtactcacctactgtctcaggaa 513
           |||||||||||||||||||||||||||||||||
Sbjct: 681 ttacaggtgtgtactcacctactgtctcaggaa 713


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space:   454209
Effective search space used:   454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no363_l07.g1 MSMg01no363_l07.g1 CHROMAT_FILE:
MSMg01no363_l07.g1 PHD_FILE: MSMg01no363_l07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:30 2005
         (465 letters)



>mm_chr4_153533555_153534419
          Length = 865

 Score =  884 bits (457), Expect = 0.0
 Identities = 463/465 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagtttcctccgaagtcgctcaacaagtaggtgcaccagcgcactacacggcagggcccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 cagtttcctccgaagtcgctcaacaagtaggtgcaccagcgcactacacggcagggcccc 606

                                                                       
Query: 61  agcggatcctgtaagtggtattgacccactctcttgtgaggtaaaggtctcatcttgaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 agcggatcctgtaagtggtattgacccactctcttgtgaggtaaaggtctcatcttgaag 546

                                                                       
Query: 121 aaccagtggaaaggacctttaagtagaggctggtgatttccgggttgctcagtacctcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 aaccagtggaaaggacctttaagtagaggctggtgatttccgggttgctcagtacctcct 486

                                                                       
Query: 181 tgaaagggatgctggcacagtcggacactctgtccccactaaaaaccattcatttaaata 240
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 485 tgaaagggatgctggcacagtcggccactctgtccccactaaaaaccattcatttaaata 426

                                                                       
Query: 241 ccgttaagatacatggaatcagagcccactgtcataagctatgtagggagtctgggagtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ccgttaagatacatggaatcagagcccactgtcataagctatgtagggagtctgggagtt 366

                                                                       
Query: 301 ttaactccagcaggagggagacacagggcatgtgctcagtattactaaaaattcggtaca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 365 ttaactccagcaggagggagacacagggcatgtgctcagtattactaaaaattcgataca 306

                                                                       
Query: 361 tcgcaaaacacctaacagccttcagagactggttggcttgctataaaagaattatttgac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tcgcaaaacacctaacagccttcagagactggttggcttgctataaaagaattatttgac 246

                                                        
Query: 421 tagggactccaggaagctaatggctactaacttaagcatcattca 465
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tagggactccaggaagctaatggctactaacttaagcatcattca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space:   389025
Effective search space used:   389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)