Query= MSMg01no364_c10.b1 MSMg01no364_c10.b1 CHROMAT_FILE:
MSMg01no364_c10.b1 PHD_FILE: MSMg01no364_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:08 2005
(455 letters)
>mm_chr4_4633175_4634032
Length = 858
Score = 812 bits (420), Expect = 0.0
Identities = 441/458 (96%), Gaps = 17/458 (3%)
Strand = Plus / Plus
Query: 1 agacagagcttgcatgtaatgtgactgaatcatagtaaaggggtaaaaaattgaagtttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agacagagcttgcatgtaatgtgactgaatcatagtaaaggggtaaaaaattgaagtttg 260
Query: 61 ccaccagaagatatgggagtttctaagctcaactcagttttgccacaaataagaactgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaccagaagatatgggagtttctaagctcaactcagttttgccacaaataagaactgag 320
Query: 121 gtattttctgtgataagtatttaggccatgaaaacactagaaatgtgcaaagaaagtgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtattttctgtgataagtatttaggccatgaaaacactagaaatgtgcaaagaaagtgct 380
Query: 181 ttctttacaaaaaaaa---cagcatatgcccttcctagtttatcaaaatcacaatgccac 237
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttctttacaaaaaaaaaaacagcatatgcccttcctagtttatcaaaatcacaatgccac 440
Query: 238 cctcaaaggtctccttcactctcttcattaacaaatatttgtggagaaaccactaaattt 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctcaaaggtctccttcactctcttcattaacaaatatttgtggagaaaccactaaattt 500
Query: 298 agtcatttgtaatctagaaaattagttaaatgagattagcataataaatacaggtggtgg 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtcatttgtaatctagaaaattagttaaatgagattagcataataaatacaggtggtgg 560
Query: 358 taagtcctaagaaataggtttgtcagggcatagaggaagggacattaagtgttaagcaag 417
||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 561 taagtcctaagaaataggtttgtcagggcatagag--------------tgttaagcaag 606
Query: 418 aatgctatacagagagagcttctcctgtcatttgaata 455
||||||||||||||||||||||||||||||||||||||
Sbjct: 607 aatgctatacagagagagcttctcctgtcatttgaata 644
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 858
Length adjustment: 10
Effective length of query: 445
Effective length of database: 848
Effective search space: 377360
Effective search space used: 377360
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no364_c10.g1 MSMg01no364_c10.g1 CHROMAT_FILE:
MSMg01no364_c10.g1 PHD_FILE: MSMg01no364_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:09 2005
(491 letters)
>mm_chr4_4775369_4776257
Length = 889
Score = 557 bits (288), Expect = e-163
Identities = 302/308 (98%), Gaps = 4/308 (1%)
Strand = Plus / Minus
Query: 1 aagacctacctgtgttacatagggagtactaggagagccagagcacttgggaggcatagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aagacctacctgtgttacatagggagtactaggagagccagagcacttgggaggcatagg 602
Query: 61 aagcagtatgctacaagtttcaggccagcctggtatgaataacaaggaaacagtgagatt 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aagctgtatgctacaagtttcaggccagcctggtatgaataacaaggaaacagtgagatt 542
Query: 121 ctatctcaagaaagcagaaagaacttaggaacttagcaagaccttgtctcaaataaaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctatctcaagaaagcagaaagaacttaggaacttagcaagaccttgtctcaaataaaagt 482
Query: 181 caataaaaatgtgtgtgtgggggggaa-ccttggagtattgacatgtaggagagctctct 239
||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 481 caataaaaatgtg---gggggggggaagccttggagtattgacatgtaggagagctctct 425
Query: 240 tggccaaccactccaaaggtgctaggttcaagccctatttctatcacataataacaataa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tggccaaccactccaaaggtgctaggttcaagccctatttctatcacataataacaataa 365
Query: 300 taataata 307
||||||||
Sbjct: 364 taataata 357
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 889
Length adjustment: 10
Effective length of query: 481
Effective length of database: 879
Effective search space: 422799
Effective search space used: 422799
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
