XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCC
TGATCTCTCCAAGACTTTTATCATGAATGGGTGTTGGATTTTGTCAAATG
CTTTCTCTGCATCTAACGAGATGATCATGTGGTTTTTGTTTTTGAGTTTG
TTTATATACTGGATTACATTGATGGATTTCCGTATATTAAACCATCCCTG
CATCCCTGGGATGAAACCTACTTGGTCAGGATGGATGATTGTTTTGATGT
GTTCTTGGATTCGGTTAGCAAGAACTTTATTGAGGATTTTTGCATCGATA
TTCATAAGAGAAATTGGTCTGAAGTTCTCTATCTTTGTTGGGTCTTTTTG
TGGTTTAGTTATCAGAGGAATTGTGGCTTCATAAAATGAGTTGGGTAGAG
TACCTTCCGTTTCTATTTTGTGGAATAGTTTGTGAAGAACTGGAATTAGG
TCTTCTTTGAAGGTCTGATAGAACTCTGTACTAAACCCATCTGGTCCTGG
GCTTTTTTTGGCTGCGATACTATTAATAACTGCTTCTATTTCTTTACGCG
ATATGTGACTGTCTAGATGGTCCACTTGATCCTGATCCACTTTTGTACCC
GCTATCTGCTCCGAATTTGTCCCTTTTCTCTAGTTTTTCTGTTTCGTTAA
CATACCCTTTTCTATAAGTATTTATGGTCGCCTCTTTTTCTCTCCCTTCC
ATTCTTTTTACCCTTTTCTTCTTTCCCCACTTTTTTTTATTTCCTCTTTT
TTCCG

CAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAAATAGGGATTCCTCAGAAATAGGA
AGTGAAGTGGGGAGCTACAGAGAACATGATCATAGAAAGGTGGAAAGACA
TGACACATCTTACATAAGGTATGTATGTATGGAGATGTCCTGGTGAACGC
CATGAATGTGTACAGTTAGCATGTGCTAAGTAGTGAAGCATATGATTATT
AATGAAAACCAGTCCACTGTATTCTTCTCATCACTCTGACGCATGGATCC
TTAGGCTAACTTCAACTCACTATGAAGCTAAGGGTGACCCTGAACTCCTG
ATTCTCCTGCCTCTCCAAGCCCAGGGATTAGAGAACAGGTAGTTAGAACT
AACAACCACACCTGACTCACAGCACTGGTTTTTCAGACTGAGCCCAAGAA
ACCCCAGGATTAAGAACATCCAACCTTGGCTGACTACTACAGGAGTCGTG
TAACCACATGTTCGTGGGCATCCCCGGAAACTAACCGACTCAGCAGGTGT
GGGGAAGAAGAANAGCACAGAACCTTCTTATTTGCTTTTAATTCAAAAGG
TTACCGTTAGAAAAAATCTTCAGCACACCCAAGGTGCAGCTGCTGTATTT
GCTGTGAAAAAAGGNTTAAATGAAAGTTTGGGAACCTCAATCATACCCCA
TTTTCGCCTTGTTCCCCCGGAAAAATAAAGCCCAAAATTGTAGAAGCCGG
CTTCCTACGC

Query= MSMg01no365_f12.g1 MSMg01no365_f12.g1 CHROMAT_FILE:
MSMg01no365_f12.g1 PHD_FILE: MSMg01no365_f12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:49 2005
         (477 letters)



>mm_chr4_69991749_69992625
          Length = 877

 Score =  915 bits (473), Expect = 0.0
 Identities = 476/477 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaatagggattcctcagaaataggaagtgaagtggggagctacagagaacatgatcatag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatagggattcctcagaaataggaagtgaagtggggagctacagagaacatgatcatag 260

                                                                       
Query: 61  aaaggtggaaagacatgacacatcttacataaggtatgtatgtatggagatgtcctggtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaggtggaaagacatgacacatcttacataaggtatgtatgtatggagatgtcctggtg 320

                                                                       
Query: 121 aacgccatgaatgtgtacagttagcatgtgctaagtagtgaagcatatgattattaatga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacgccatgaatgtgtacagttagcatgtgctaagtagtgaagcatatgattattaatga 380

                                                                       
Query: 181 aaaccagtccactgtattcttctcatcactctgacgcatggatccttaggctaacttcaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaccagtccactgtattcttctcatcactctgacgcatggatccttaggctaacttcaa 440

                                                                       
Query: 241 ctcactatgaagctaagggtgaccctgaactcctgattctcctgcctctccaagcccagg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcactatgaagctaagggtgaccctgaactcctgattctcctgcctctccaagcccagg 500

                                                                       
Query: 301 gattagagaacaggtagttagaactaacaaccacacctgactcacagcactggtttttca 360
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 501 gattagagaacaggtagttagaactaacgaccacacctgactcacagcactggtttttca 560

                                                                       
Query: 361 gactgagcccaagaaaccccaggattaagaacatccaaccttggctgactactacaggag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gactgagcccaagaaaccccaggattaagaacatccaaccttggctgactactacaggag 620

                                                                    
Query: 421 tcgtgtaaccacatgttcgtgggcatccccggaaactaaccgactcagcaggtgtgg 477
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcgtgtaaccacatgttcgtgggcatccccggaaactaaccgactcagcaggtgtgg 677


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space:   404889
Effective search space used:   404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)