XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAA
CTCAAATCTTCACTGATAGAGAAAGGGCAATTTGCAAATTCATCTGGAAT
AATAAAAAACCCTAGGATAGCCAAAGCTATTCTCAACAATAAAAGAACCT
CTGGTGGAATCACCATCCCTGACATTAAGTTGTACTACAGAGCAATTGTT
ATAAAAACTGCATGGTGCTGGTACAGTGACAGACAGGTAGATCAATGGAA
TAGAATTCAAGACCCAGATATGAATCTACACATCTATGGTCACTTGATGT
TTGTCAAGGGAGCTAAAATCATCCAGTGGAAAAAAGACAGCATTTTCAAT
AAATGGTGCTGGCACAAGTAGCGGTTAATATGAAGAAGAATGCAAATTGA
CACATTCTTATCTCCTTGTACAAAGCTCAAGTCTAAGTGGATCAAAGACC
TCCACATTAGACCAGAGACACTGAAATTAACAGAGGAGAAAGTGGCGAAA
AGTGGGCACAGGGGAAAAATTCCTAAACAGAACAGTAATGGCTTGTGCTG
TAAGATCAAGAATTAATTAATGGGACCTCATAAAATTGTAAAGCTTCCTG
TAAGGCTAAAGATACTGTCTATAAGACCAAAAGGCCACCACCAGATTGGG
AAAGGATTTTTACCAATCCTCAATCTGATAGAGGACTGGACATCCCTATA
CACATATAGCTCTTTAATCTTGGATCCCCAATTTCTATTTACCCCACTAT
TAATGGGCTTACTTACCAAACATATAATCCCC

CAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATCTGGCAAACAGACAATCCAGAAGG
CTCTGTGACCATTTTGTGATGTGAATTCTCAAAACACAAAGGGGCTGATA
AATATTTCACATTAACAAAGGCTTTGGGAAGCATTCGGATGTCAAAAATG
TAACAATTTTTTCACATTTCTAGTTGAAATTACAGGTAGCATTGCCCATC
CACTCACTTACCCAGAATCCTCATCAATTACCCTTATCCTGTGTCCTTTA
GAAAATCAGGTCACATTTCAACGCCATAGAGGCTGCGCAGTCCCCTGGGG
TTCCCACAAGCATCCCTGTTCCAGCCTCTGTGGTCCCCCTGACAAGGGAC
CCAGGCTACTGAGCCTGGGAACCCATCCCAAAAGCCCAGCCCTACGGAGA
CTTGGGAACCTCTTACTTCTCCTATTAGCTCAGGGTGTCACAGGTCTCTG
GCCTTAAGAATCAGTGCCCCCACAGATCCTTCTGATCAAGATCCTAACTT
TTTTCTTCTAGGAAGAAGCCTTAGAACTCCACATTTTGAGTGAGAGGCAC
GCAATAGGAATGAAATACACAAGGAAGCCAGTGGGAAATGACTGCTGGCC
ATGGAGATCGGAATCGCAATCCAAGGCTGGGCTGGGGATGTTGCAAGTGT
ACAGCATCTTTTTCAGTAGGGACTGTTGCCTCCGGTTGGAAAAACCATTG
GCCACCTGGCTG

Query= MSMg01no365_o21.g1 MSMg01no365_o21.g1 CHROMAT_FILE:
MSMg01no365_o21.g1 PHD_FILE: MSMg01no365_o21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:34 2005
         (556 letters)



>mm_chr4_4059470_4060421
          Length = 952

 Score = 1017 bits (526), Expect = 0.0
 Identities = 547/556 (98%), Gaps = 4/556 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atctggcaaacagacaatccagaaggctctgtgaccattttgtgatgtgaattctcaaaa 60
           ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 752 atctggcaaacagacaatccagaaggctctgtggccattttgttatgtgaattctcaaaa 693

                                                                       
Query: 61  cacaaaggggctgataaatatttcacattaacaaaggctttgggaagcattcggatgtca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 cacaaaggggctgataaatatttcacattaacaaaggctttgggaagcattcggatgtca 633

                                                                       
Query: 121 aaaatgtaacaattttttcacatttctagttgaaattacaggtagcattgcccatccact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 aaaatgtaacaattttttcacatttctagttgaaattacaggtagcattgcccatccact 573

                                                                       
Query: 181 cacttacccagaatcctcatcaattacccttatcctgtgtcctttagaaaatcaggtcac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 cacttacccagaatcctcatcaattacccttatcctgtgtcctttagaaaatcaggtcac 513

                                                                       
Query: 241 atttcaacgccatagaggctgcgcagtcccctggggttcccacaagcatccctgttccag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 atttcaacgccatagaggctgcgcagtcccctggggttcccacaagcatccctgttccag 453

                                                                       
Query: 301 cctctgtggtccccctgacaagggacccaggctactgagcctgggaacccatcccaaaag 360
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cctatgtggtccccctgacaagggacccaggctactgagcctgggaacccatcccaaaag 393

                                                                       
Query: 361 cccagccctacggagacttgggaacctcttacttctcctattagctcagggtgtcacagg 420
           |||||||||||||||||||||||||||    |||||||||||||||||||||||||||||
Sbjct: 392 cccagccctacggagacttgggaacct----cttctcctattagctcagggtgtcacagg 337

                                                                       
Query: 421 tctctggccttaagaatcagtgcccccacagatccttctgatcaagatcctaactttttt 480
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tctctggccttaagaatcattgcccccacagatccttctgatcaagatcctaactttttt 277

                                                                       
Query: 481 cttctaggaagaagccttagaactccacattttgagtgagaggcacgcaataggaatgaa 540
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 276 cttctaggaagaagccttagaactccacattttgagtgagaggcaagcaataggaatgaa 217

                           
Query: 541 atacacaaggaagcca 556
           ||||||||||||||||
Sbjct: 216 atacacaaggaagcca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 952
Length adjustment: 10
Effective length of query: 546
Effective length of database: 942
Effective search space:   514332
Effective search space used:   514332
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)