NNNTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGAGATCCGC
GGAATTCCTCTCGTACATTTTACCTTTGATGAGTATGAAGTGCCCCTCCT
TGTCTTTTTTGATGACTTTGGGTTGGATTTTATTCAATATTAGAATGGCT
ACTCCAGCTTGTTTCTTCATACCATTTGCTTGGAAAATTGTTTTCCAGCC
TTTCATTCTGAGGTAGTGTCTATCTTTTCCCCTGAGATGGGTTTCCTGTA
ACCAGCAAAATGTTGGGTCCTGTTTGTGTAGCCAGTCTGTTAGTCTATGT
CTTTTTATTGGAGAGTTGAGTACTATTGATATTAAGAGATATTAAGGAAA
AGTAATTGTTGCTTCCTATTATTTTTGTTGTTAAAGTTGGCATTCTGTTC
TTGTGGCTGTCTTCTTTTAGGTTTGTTGAGGGATTACCTTCCTGCTTTTT
CTAGGACATGGTTTCTGTCCTTGTATTGGTTTTTTTTCTTTTTTTTTCTG
TTATTATCCTTTGAAGGGCTGGATTCGTGGAAAGATAATGTGNGAATTTG
TTTCTGTTGTGAAAACTTTTGCTTCTCCATCTAAGGAATTGACAGTTGGC
CGGGATAATAACCCGGGCTGAAATTTTGGGCTCCTTAAGCCGGAATGAAT
TTTTTCCCGGCTTTTTGGCGTTTTATATTTCGGCGGAAAACTCGCTTATT
TCTAACCATTTCCTTTTAAATTAATTGCCTTTTTTCCCCCCATTTTATTT
N

NNTTCTATGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTTCCTGCTCAGCACCGTATA
ACAAGCAGATGCCCACACTGACTAGAAGGTTTGCTCAATGTGAGCCCCAT
GACCCTCCACTGTAGATCCATGTGTGATGACCAGCCAGGCCTCTATCTGG
TACTGGGGGGTGTCTGTGATCTATACAGCTAACACCTGCTCAGTGCTGGA
CTCCATGTTTCTCCTCATGTAGAAACAGAAGACATCAGGCATCAGCCTGG
AGCAAAAGGATGGCTTAAAGACTGAAATACTTGTCTCAACAAGTGAACCT
CTGGCTTAGCAATGGAAATAGCTGAGCCAATTCAAGAGCTTTATATGAAA
GCAAATGTAACATCTAGAGAAGAGGATGGAGTCCACCATAAACTGTTCTG
GGAAGTCTAATTATTCACAGGACTAAATATGCTCATTCATTAAACAAGTT
AGAAAATCTTAACTAAGGCTATCTGTGTCCTTAAATATATACAAGTTTAA
ATGTCAGGAAAAGTATAACCTAACTTAATATGCCTATATGGTGAGAGTGT
TTAACTGTTCTAAGGACCCACAATGAAAACATTATTTTCCTATGATGCCC
AATGTGGGAAGCTGGTGGGGAACCCTGGAAAATGTTTCTTCAATAAAACC
GGTTTAAAAACTGGCCCCTGGTTTGGTGGAGTGGAATATTTCCTTCCCCT
ATTTTATTTTTTTTCG

Query= MSMg01no366_h18.g1 MSMg01no366_h18.g1 CHROMAT_FILE:
MSMg01no366_h18.g1 PHD_FILE: MSMg01no366_h18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:21 2005
         (444 letters)



>mm_chr4_10559619_10560462
          Length = 844

 Score =  843 bits (436), Expect = 0.0
 Identities = 442/444 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgttcctgctcagcaccgtataacaagcagatgcccacactgactagaaggtttgctcaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgttcctgctcagcaccgtataacaagcagatgcccacactgactagaaggtttgctcaa 260

                                                                       
Query: 61  tgtgagccccatgaccctccactgtagatccatgtgtgatgaccagccaggcctctatct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgagccccatgaccctccactgtagatccatgtgtgatgaccagccaggcctctatct 320

                                                                       
Query: 121 ggtactggggggtgtctgtgatctatacagctaacacctgctcagtgctggactccatgt 180
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 ggtactggggggtgtctgtgatctatacagctaacacctgttcagtgctggactccatgt 380

                                                                       
Query: 181 ttctcctcatgtagaaacagaagacatcaggcatcagcctggagcaaaaggatggcttaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttctcctcatgtagaaacagaagacatcaggcatcagcctggagcaaaaggatggcttaa 440

                                                                       
Query: 241 agactgaaatacttgtctcaacaagtgaacctctggcttagcaatggaaatagctgagcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agactgaaatacttgtctcaacaagtgaacctctggcttagcaatggaaatagctgagcc 500

                                                                       
Query: 301 aattcaagagctttatatgaaagcaaatgtaacatctagagaagaggatggagtccacca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aattcaagagctttatatgaaagcaaatgtaacatctagagaagaggatggagtccacca 560

                                                                       
Query: 361 taaactgttctgggaagtctaattattcacaggactaaatatgctcattcattaaacaag 420
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 561 taaactgttctgggaagtctaattattcacaggactgaatatgctcattcattaaacaag 620

                                   
Query: 421 ttagaaaatcttaactaaggctat 444
           ||||||||||||||||||||||||
Sbjct: 621 ttagaaaatcttaactaaggctat 644


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space:   361956
Effective search space used:   361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)