NCCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGGATCCGC
GGAATTCTACTACATATTCCAAGAAGAGTTAATACCAATGCCCCTCAAGT
TATTATACAAAGTAGAAATAGAGGGAACATTGCCAAATTCATTTTATGGG
CCACTATCAGTCTAATACCCAAACCACACGAAGATCAAACTAGAAAGAGA
TTTCCAGACCAATTTCCCTCATGAATATTGATGAAAATATACACAAATAA
AATACTCGGAAGCTAAATTCACGAATACATTAAAAAGATCATCCACCACA
ACCAAGTACACCTTATCCTGGAGAGGTAGGGATTGTTCAACATATGAACA
TCTTTTAATATAATCCAACATAAAACAAACTTTTAAAAAAGATACTTTAT
TATTTTATTAGATGCTGAAAAAGCCTTCGACAAAAATCCAACACGCTTTC
ATTATAAAAGCCTTAGATCAGGAATGTAAAGAACATCTAAACCTAAAAAA
GACAATTTACAACAAGCCTATAGCCAACATCAAATTAAATGGAGAGAAAT
TCAATGTAATTCCACAAGGCTTCCTACTCACTCCATATCAATTCAATATA
CTGCTTGAAATCCTAGCTANGACAGTAAGACNACTTAAGGAGACCAGAAG
GACACNATTTGAAATTGAGGTCAAATATTACTATTTGGAGATGATATGAT
AGAATTCTACCTGACCCCCCCAATTCTTTCTGAATCTCCCCGGTTAAAAA
AATTTTCGGGGATGGGGGGGAG

NNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGCATGTTTCCAAAAATTCCC
TATGATAATTTTGATTAAAATTCCATTATACTCAGAAGTTAGGATGAGAT
TTAACAAGGGATGTGAAAGAAAGGTGTGCACTTAGACATTCAAAGCAGTG
AAGATAATCTTCAAGCATTTTTACATTGACATCTTCAGTGCCCAGCAACT
AATTGTTGATGTTGCCACACAACAGCATCTCTCAGGAGCATTCAAAAATT
GATAACTTTTAGATATGTCATGGATGAAAATTTGTTTTCCTTAATGGATT
ATGGCACAGAGTAACTGAAACAATTCCAAAAACAACACATAGCAGTAGTT
CACGGACACATAAAATGTTAGCAGTACATCTTATCATTGGTATATCCATG
TCTAGGAAATAGAATCAAATCTACAAAAGTTTTTTTAGAGGGATTCCATT
TAAAAATCATTCCTTTAGAATGTGCCATAGAATTTTATAGGCTTGCTTTT
CTGATATGTCATCAGNATTTCCCATGGCAAGAGCAAACTTTTTTGTTTAT
TAAGAAAATGAGGTAGAATTAAAGATTATCCCGTTTATTTTGCCGGATGA
TGGAAGCTTTATTTGTAGTAGATAAGAATTATTTTTTGAGCCGGGCTGGT
GGGGCACGCCTTTTATCCTATCCCCGCGGAGGGGAAGGGGGGGAATTTTG
TTTTTTATCCCCCCCGTTCTCCAAAAGA

Query= MSMg01no366_j24.g1 MSMg01no366_j24.g1 CHROMAT_FILE:
MSMg01no366_j24.g1 PHD_FILE: MSMg01no366_j24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:31 2005
         (437 letters)



>mm_chr4_5763826_5764662
          Length = 837

 Score =  830 bits (429), Expect = 0.0
 Identities = 435/437 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttgcatgtttccaaaaattccctatgataattttgattaaaattccattatactcagaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgcatgtttccaaaaattccctatgataattttgattaaaattccattatactcagaa 260

                                                                       
Query: 61  gttaggatgagatttaacaagggatgtgaaagaaaggtgtgcacttagacattcaaagca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttaggatgagatttaacaagggatgtgaaagaaaggtgtgcacttagacattcaaagca 320

                                                                       
Query: 121 gtgaagataatcttcaagcatttttacattgacatcttcagtgcccagcaactaattgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgaagataatcttcaagcatttttacattgacatcttcagtgcccagcaactaattgtt 380

                                                                       
Query: 181 gatgttgccacacaacagcatctctcaggagcattcaaaaattgataacttttagatatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatgttgccacacaacagcatctctcaggagcattcaaaaattgataacttttagatatg 440

                                                                       
Query: 241 tcatggatgaaaatttgttttccttaatggattatggcacagagtaactgaaacaattcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcatggatgaaaatttgttttccttaatggattatggcacagagtaactgaaacaattcc 500

                                                                       
Query: 301 aaaaacaacacatagcagtagttcacggacacataaaatgttagcagtacatcttatcat 360
           || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 aagaacaacacatagcagtagttcacgaacacataaaatgttagcagtacatcttatcat 560

                                                                       
Query: 361 tggtatatccatgtctaggaaatagaatcaaatctacaaaagtttttttagagggattcc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tggtatatccatgtctaggaaatagaatcaaatctacaaaagtttttttagagggattcc 620

                            
Query: 421 atttaaaaatcattcct 437
           |||||||||||||||||
Sbjct: 621 atttaaaaatcattcct 637


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space:   354384
Effective search space used:   354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)