NNNTTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAAATCCGC
GGAATTCTTCCCCTATGCCCATATCGTCGAGGATTTTCCCCACGTTCTCC
TCTATAAGTTTTACTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCACTT
AGATTTGACCTTAGTACCAGCTGAGACCAAAGGATGGACCATCCAGAGAC
TGCCCCAACCAGGGATCCATCCCATAATCAGCCACCAAACACAGATACTA
TTGCATATGCCAGCAAGATTTGCTGAAAGCACCCTAGTATTGCTGTCTCT
TGTGAGGCTATGCCAGTGCCTGTTTTATATAGAAGTGGATGCTCACAGTC
ATCTATAGCATGGAACACAGGGCCCCCAGTGAAGGAGCTAGAGAAAGTAC
CTAAGGAGCTGAAGGGATCTGCAACCCTTCAGGTGGAACAAAAATATGAA
CTAACCAGTACCCCAAAGCTTGTGTCTCTAGCTTTATCTGTAGCAGAAGA
TGGCCTAGTTGGCCATCATTGGGAAGAGAGGCCCTTTGGTATTGCCAACT
TTATATGCCCCAGTACAGAGGAATGCCAGGGCCCATAAAGGTGAGTGGGT
GGTTAGTGGAACACCTCTTTCTTAGTTCCTTCGATATATTCCCCATTACT
CCTATTTATTTTCTTTACCTCTTTTCCCTTTCCTTACCCCCTCCCCTTTT
ACTCTTGCTTATTTTTTTTTCCTACTTCTTCCCTTTACTCCCATTTTTTA
CTACTATTTTTTTCCCG

NNTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATTTGGTCATTTGTTTGGTCATAG
TTAGCTCTCATCTGAAGCTCACAGAAAGCCTGGTATCCATTTGGCAATAT
CACTTGATCTCCATAGAATCCATTATCAGCTGCTGGTTTACTCTGCTGAT
CTCTGAAAGAATTCTGTTCAGAAAAGGAGGTTATGATTTGATTGGGATGA
AGGGCCTGACTATAACTGGGTGCTGCCATCTGACTCCCATAGAGAGTCAG
ATGCCCTCCATTCCTGGTTGTTTTATGACTGTAGTAGGAGATCTGGTCAC
CTCTTAAAGTTATCTCAAGCTCACCCTGAAATGTCTGGTCACATACATAA
GCAAGGAGGTGATCCACAATTGGTTCCTGGTCTGGATAGATTCCAGAGAG
AGCAATTTGATGAATATCAAAGGCAATCCTCTGACTCTCACACATGACTG
TAGTTTTGATAAAGAGATTCTTGTCAGGGCTCAGTGTCCTCATCCAGGAT
TCTTCACTGAAGAGAGTCTCCCTGTAATCAAGAACTGCTATCTTCTCTTC
CTAAAGGTAAAATTGTCTTGGGGGTGGTGTTTAAACTGTCTAACTTGAGG
GTAATCATGGGAATTTTTTTTCTGTTCTACAAAAACACCCCGGTTGGTTA
AATCAATACCCTCCTCTCTCTCTCCTTTATATATACCCAACACCCTTCCT
CGTCTTTTTTTATTTTTTCCATCCCCCCTTCT

Query= MSMg01no366_k09.g1 MSMg01no366_k09.g1 CHROMAT_FILE:
MSMg01no366_k09.g1 PHD_FILE: MSMg01no366_k09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:33 2005
         (438 letters)



>mm_chr4_90026957_90027794
          Length = 838

 Score =  793 bits (410), Expect = 0.0
 Identities = 431/438 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atttggtcatttgtttggtcatagttagctctcatctgaagctcacagaaagcctggtat 60
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 atttggtcatttgtttggtcatagttagctctcatttgaagctcacagaaagcctggtat 260

                                                                       
Query: 61  ccatttggcaatatcacttgatctccatagaatccattatcagctgctggtttactctgc 120
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccatttggcgatatcacttgatctccatagaatccattatcagctgctggtttactctgc 320

                                                                       
Query: 121 tgatctctgaaagaattctgttcagaaaaggaggttatgatttgattgggatgaagggcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgatctctgaaagaattctgttcagaaaaggaggttatgatttgattgggatgaagggcc 380

                                                                       
Query: 181 tgactataactgggtgctgccatctgactcccatagagagtcagatgccctccattcctg 240
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgactataactgggtgctgccatatgactcccatagagagtcagatgccctccattcctg 440

                                                                       
Query: 241 gttgttttatgactgtagtaggagatctggtcacctcttaaagttatctcaagctcaccc 300
           |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttgtcatatgactgtagtaggagatctggtcacctcttaaagttatctcaagctcaccc 500

                                                                       
Query: 301 tgaaatgtctggtcacatacataagcaaggaggtgatccacaattggttcctggtctgga 360
           ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 501 tgaaatgtctggtcatatacataagcaaggaggtggtccacaattggttcctggtctgga 560

                                                                       
Query: 361 tagattccagagagagcaatttgatgaatatcaaaggcaatcctctgactctcacacatg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tagattccagagagagcaatttgatgaatatcaaaggcaatcctctgactctcacacatg 620

                             
Query: 421 actgtagttttgataaag 438
           ||||||||||||||||||
Sbjct: 621 actgtagttttgataaag 638


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space:   355641
Effective search space used:   355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)