Query= MSMg01no366_k14.b1 MSMg01no366_k14.b1 CHROMAT_FILE:
MSMg01no366_k14.b1 PHD_FILE: MSMg01no366_k14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:34 2005
(490 letters)
>mm_chr4_154628033_154628922
Length = 890
Score = 687 bits (355), Expect = 0.0
Identities = 382/391 (97%), Gaps = 3/391 (0%)
Strand = Plus / Minus
Query: 102 gtcactatgtctgactttttctttttttttctttt-ttttctttttttttttatttttgg 160
||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||
Sbjct: 890 gtcactatgtctgactttttcttttcttttcttttcttttttttttttttttatttttgg 831
Query: 161 tttttcaagacagggtttctctgtatagccctggctgtcctggaacgcactttgtaaacc 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 tttttcaagacagggtttctctgtatagccctggctgtcctggaacgcactttgtaaacc 771
Query: 221 aggctggcctcgaacgcagaaatccacctgtctctgcctcccgagtgctgggagttattg 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 770 aggctggcctcgaacgcagaaatccacctgtctctgcctcccgagtgctgggagttaagg 711
Query: 281 tgtgcgccaccacacccagcgggaatgttttcttgatgtgaaaggaccaagccccaccgt 340
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 710 tgtgcgccaccacacccagcgggaatgttttcttgatgtgaaaggaccaagccccaccat 651
Query: 341 gtaagattcagtcatatgg-tctctggcgctgcatttccggaaggcccatacagctcctg 399
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 650 gtaagattcagtcatatggct-tctggcgctgcatttccggaaggcccatacagctcctg 592
Query: 400 tacctcaggagtgctgggccagtgaccctggaaagggcatcgtaaccaaagaacgagggt 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tacctcaggagtgctgggccagtgaccctggaaagggcatcgtaaccaaagaacgagggt 532
Query: 460 agcatatgaacagactgtccacccctgatgg 490
||||||| |||||||||||||||||||||||
Sbjct: 531 agcatataaacagactgtccacccctgatgg 501
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 890
Length adjustment: 10
Effective length of query: 480
Effective length of database: 880
Effective search space: 422400
Effective search space used: 422400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_k14.g1 MSMg01no366_k14.g1 CHROMAT_FILE:
MSMg01no366_k14.g1 PHD_FILE: MSMg01no366_k14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:34 2005
(447 letters)
>mm_chr4_154549373_154550219
Length = 847
Score = 849 bits (439), Expect = 0.0
Identities = 445/447 (99%)
Strand = Plus / Plus
Query: 1 tactccccagctctcagcttctgctggcttttatattctctcctagtcccagaactccaa 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tactccccagctctcagcttccgctggcttttatattctctcctagtcccagaactccaa 260
Query: 61 gaggcaactaacactgaagggcacagggtcctttaaaaggtccaggcacataaaataaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaggcaactaacactgaagggcacagggtcctttaaaaggtccaggcacataaaataaat 320
Query: 121 cctactaaactcccaccccaagtttgatttactcacttcatgttatgtgtgtaccatgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctactaaactcccaccccaagtttgatttactcacttcatgttatgtgtgtaccatgtg 380
Query: 181 cgtgcctgctgcagtggtcagaacatgtgtaccatgtgcgtgcctgctgcagaggtcaga 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 cgtgcctgctgcagtggtcagaacatgtgtaccatgtgcatgcctgctgcagaggtcaga 440
Query: 241 acatgctttgggtcacctgacactggatttagggatggttgttggagctgggaactgaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acatgctttgggtcacctgacactggatttagggatggttgttggagctgggaactgaac 500
Query: 301 caaggtcctctccaagagcagtaaatgctcttagccactgaatcatgtctctagcccttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaggtcctctccaagagcagtaaatgctcttagccactgaatcatgtctctagcccttt 560
Query: 361 acagaaatggcactcgaggcagtgtgacgatgcactagggctgaggactgatgtgcccga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acagaaatggcactcgaggcagtgtgacgatgcactagggctgaggactgatgtgcccga 620
Query: 421 ctcaggggaggtccagctatccaggaa 447
|||||||||||||||||||||||||||
Sbjct: 621 ctcaggggaggtccagctatccaggaa 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
