NTTCTAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCAACTTGCTATCTCTAATTTGAATAGGTTTATTCCAATTTTTT
TGTTTGTTTTGTTTTTTTTTTTTTTTGAGACAGGGTTTCTCTGTATAGCT
CCGACTGTCCTGAAACTAACTCTGTAGACCAGGCCTGCCTCTGCCTCCCA
AGTGCTGAGATTAAAGGCATGGACCACCACTGCCAGGCAATTCCAATTTT
TTGTTTGCTGTGTGTTTTGTTTTTTTGTGAATCACCAGCAAATGTTGGAA
TCAAACACAGGTCTACTGGAAGAGCCGTAAGTGCTTTTAACCACTGAGCC
ATTTCTTCAGTCCCCTTTTAAGAGTTCCCTATGACAATGTCTGAGATAAC
CCATTTCCCCGTGCCTTCAACAATATTTGACATTGTTAGTTTGGATTTTA
CTGCTGTGAACAGACACCACGACCAAAGCAACTTTTATAAGGACTACATT
TAATTGGGGCTAGCTTAAAGTTTGAGAGTTTCAGTCCTTTATCAATTCAG
GAGCATGGCAGTTTCCAAGAAGCAAGGAGCAGGGGGGAGCTGAAATTACT
GCATCTCCCTATTAAAGCTTCCCAAAAAAACTTGATATTTCTTCCTGGGC
GGAAGTTCTAAACCCACCCAATTTCTCCTCAAAAGGCCCACCTATTCCAT
ATGGCCACTCCTCAAAAAATGCCCTTCTTTGGCTCAAAT

GACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCATGCCCCTCACCTACAGGCCCCCACAA
ACACTGGCAGTGTTTAGAGTCACTGTACAGGTCAAGATTGGGAAATGTGA
AACAAGACAGAACTGGATTCTGTTTAAATTCTTTAGGCTTCAGATTCTTC
ATGGTGCCTCTTTCTCAAGATTATTACAGCAGACGCAGTAACAGGTGAAA
GTGGTCAGCATGAGGATCAGGTACGCACTCAAGCATCCGATAAGTTTCAT
GTATTCATATCGGAGCATGCTTGTCCTCAGAAGCCAAAACAACCATAATC
AAAAACAACTCACTCAGCTCTGACTACCACACAACAGTGACCACTGAGAA
ATGAGGGAACGGGAAAAGCAATAGGTGACTCATTACAAGGAAAATATAAG
ACTGAAGTAAAATAATCTAAAAACATACTTTTGCCTAAGGTATGCTTANN
ATAAATAANATATCTGTAAATAACAAACATAAATAGATTCTCCCTCATTT
AGCCACCATGCATGTGAGTCCTAGCACCTAAAAATAAAAATCTGCGGTGG
AGAAAACATGAGAAGGAAAATTAATGTCGGCACCAAATTACAGAAAACCT
CTGGCCTGGTGCTGGCCCTATGTTAACAAGGGACTTATAACAGTCCTAAT
GAAAAAACCCCGGGGAACATTTTTTTCAACTGGGCCATT

Query= MSMg01no368_l15.g1 MSMg01no368_l15.g1 CHROMAT_FILE:
MSMg01no368_l15.g1 PHD_FILE: MSMg01no368_l15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:15 2005
         (480 letters)



>mm_chr4_21492636_21493515
          Length = 880

 Score =  864 bits (447), Expect = 0.0
 Identities = 471/480 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   catgcccctcacctacaggcccccacaaacactggcagtgtttagagtcactgtacaggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgcccctcacctacaggcccccacaaacactggcagtgtttagagtcactgtacaggt 260

                                                                       
Query: 61  caagattgggaaatgtgaaacaagacagaactggattctgtttaaattctttaggcttca 120
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caagattgggaaatgtgaaacgagacagaactggattctgtttaaattctttaggcttca 320

                                                                       
Query: 121 gattcttcatggtgcctctttctcaagattattacagcagacgcagtaacaggtgaaagt 180
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 gattcttcatggtgcctctttcccaagattattacagcagacgcagtaacaggtgaaagt 380

                                                                       
Query: 181 ggtcagcatgaggatcaggtacgcactcaagcatccgataagtttcatgtattcatatcg 240
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtcagcatgaggatcaggtacgcgctcaagcatccgataagtttcatgtattcatatcg 440

                                                                       
Query: 241 gagcatgcttgtcctcagaagccaaaacaaccataatcaaaaacaactcactcagctctg 300
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagcatgcttgtcctccgaagccaaaacaaccataatcaaaaacaactcactcagctctg 500

                                                                       
Query: 301 actaccacacaacagtgaccactgagaaatgagggaacgggaaaagcaataggtgactca 360
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actaccagacaacagtgaccactgagaaatgagggaacgggaaaagcaataggtgactca 560

                                                                       
Query: 361 ttacaaggaaaatataagactgaagtaaaataatctaaaaacatacttttgcctaaggta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttacaaggaaaatataagactgaagtaaaataatctaaaaacatacttttgcctaaggta 620

                                                                       
Query: 421 tgcttannataaataanatatctgtaaataacaaacataaatagattctccctcatttag 480
           ||||||  |||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 621 tgcttaaaataaataaaatatctgtaaataacagacataaatagattctccctcatttag 680


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space:   408900
Effective search space used:   408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)