Query= MSMg01no369_c11.b1 MSMg01no369_c11.b1 CHROMAT_FILE:
MSMg01no369_c11.b1 PHD_FILE: MSMg01no369_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:48 2005
(400 letters)
>mm_chr4_8789799_8790600
Length = 802
Score = 636 bits (329), Expect = 0.0
Identities = 369/383 (96%), Gaps = 2/383 (0%)
Strand = Plus / Plus
Query: 20 gaaactgattgcaatctgtcctcctgaaggacaccctcagttacgtgaagatgtctgcta 79
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gaaactggttgcagtctgtcctcctgaaggacaccctcagttacgtgaagatgtctgcta 279
Query: 80 ctcatttccccactcctccagcatgcttccctcacacggtctagctcccaggggtctagg 139
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ctcatttgcccactcctccagcatgcttccctcacacggtctagctcccaggggtctagg 339
Query: 140 ctttgcatagtcttgagtgcgtttccctggtcttcagacaaagcctgacccagcccagag 199
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ctttgcatagtcttaagtgcgtttccctggtcttcagacaaagcctgacccagcccagag 399
Query: 200 ctataagctcttgtttccagagatttcttttaagcacctagcccttgtgaatgcccaata 259
|||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 400 ctataagctcttgtttccagagatttcttttaagcacctaacccttgtgagtgcccaata 459
Query: 260 tacaactttctatttagcaacacagatctcttcctgtccttttgtgattaatatttttca 319
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tacaactttctagctagcaacacagatctcttcctgtccttttgtgattaatatttttca 519
Query: 320 aacattttat--tttttttcactgagtttgggccatctcctctcttgctactaacagcaa 377
|||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 520 aacattttctgttttttttcactgagtttgggccatcccctctcttgctaccaacagcaa 579
Query: 378 cctttcagcctccccacttacaa 400
|||||||||||||| ||||||||
Sbjct: 580 cctttcagcctccctacttacaa 602
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 802
Length adjustment: 9
Effective length of query: 391
Effective length of database: 793
Effective search space: 310063
Effective search space used: 310063
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no369_c11.g1 MSMg01no369_c11.g1 CHROMAT_FILE:
MSMg01no369_c11.g1 PHD_FILE: MSMg01no369_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:48 2005
(297 letters)
>mm_chr4_8952277_8952973
Length = 697
Score = 545 bits (282), Expect = e-160
Identities = 294/300 (98%), Gaps = 4/300 (1%)
Strand = Plus / Minus
Query: 1 aaaattcagaccgagcaggttgtgggtcccagaaaagaagcttcaggc----tcattcat 56
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 524 aaaattcagaccgagcaggttgtgggtcccagaaaagaagcttcaggctcattcattcat 465
Query: 57 tcattcattcattcattccacaggtatttacttatttcttctgaaaagacaggcagagct 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tcattcattcattcattccacaggtatttacttatttcttctgaaaagacaggcagagct 405
Query: 117 gaagcatcaggcacatcttcttcacatcctgactcactcaaaccttggacacagaattag 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gaagcatcaggcacatcttcttcacatcctgactcactcaaaccttggacacagaattag 345
Query: 177 agagacagggataaaaaggctgcaaacctggggactgacaagatcaagtcccagagttga 236
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 344 agagacagggataaaaaggctgcgaacctggggactgacaagatcaagtcccagagttga 285
Query: 237 gtatttctaatgtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 296
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gtatttctaaagtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 225
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 74
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 697
Length adjustment: 9
Effective length of query: 288
Effective length of database: 688
Effective search space: 198144
Effective search space used: 198144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
