Query= MSMg01no369_l12.b1 MSMg01no369_l12.b1 CHROMAT_FILE:
MSMg01no369_l12.b1 PHD_FILE: MSMg01no369_l12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:31 2005
(351 letters)
>mm_chr4_130239078_130239827
Length = 750
Score = 383 bits (198), Expect = e-111
Identities = 216/222 (97%), Gaps = 1/222 (0%)
Strand = Plus / Plus
Query: 129 cacgttactaggtttttagtgctcactacacatgagccttcaagcttttgttaaaagttc 188
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 329 cacgttactaggtttttagtgctcactacacatgagccttcaagcttttgttaaaagtac 388
Query: 189 cttcatttctgataggcattgctagctccctcttttttccagagttggatactattgtgt 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 cttcatttctgataggcattgctagctccctcttttttccagagttggatactattgtgt 448
Query: 249 cagtgtggtacttggttgaacttttttttttttgttttggtttttttttttttcgagaca 308
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 449 cagtgtggtacttggttgaacttttttttttt-gttttggtttttttttttttcgagaca 507
Query: 309 gggtttctctgtgtagccctggctgtcctggagctctctttg 350
|| ||||||||||| ||||||||||||||||| ||| |||||
Sbjct: 508 ggatttctctgtgttgccctggctgtcctggaactcactttg 549
Score = 244 bits (126), Expect = 7e-69
Identities = 126/126 (100%)
Strand = Plus / Plus
Query: 20 actatctgcagtgggcaaaaatcattcccctcgcaggagacagtcataggcagtgactct 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 actatctgcagtgggcaaaaatcattcccctcgcaggagacagtcataggcagtgactct 69
Query: 80 gaagccgccccatattctacacctaggagtaaaacaaaaacatttacttcacgttactag 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 gaagccgccccatattctacacctaggagtaaaacaaaaacatttacttcacgttactag 129
Query: 140 gttttt 145
||||||
Sbjct: 130 gttttt 135
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 351
Length of database: 750
Length adjustment: 9
Effective length of query: 342
Effective length of database: 741
Effective search space: 253422
Effective search space used: 253422
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no369_l12.g1 MSMg01no369_l12.g1 CHROMAT_FILE:
MSMg01no369_l12.g1 PHD_FILE: MSMg01no369_l12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:31 2005
(428 letters)
>mm_chr4_130396550_130397377
Length = 828
Score = 797 bits (412), Expect = 0.0
Identities = 424/428 (99%)
Strand = Plus / Minus
Query: 1 cttccccagctgggagggagacaggagaggaaggggtcatctggcttcctggagtcaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 cttccccagctgggagggagacaggagaggaaggggtcatctggcttcctggagtcaggg 569
Query: 61 cagcgcctgggcagagtggacttcctgtttcccgagggaatgaaaggctagggtgaagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 cagcgcctgggcagagtggacttcctgtttcccgagggaatgaaaggctagggtgaagtt 509
Query: 121 gcttgcctctctcccctccccttagccacggtgaaatctgtccccagatcacctcccctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gcttgcctctctcccctccccttagccacggtgaaatctgtccccagatcacctcccctg 449
Query: 181 cgtcaccccgaagcctgtgtgggtgagaaagttgcagagacaagggtcctttgtctctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 cgtcaccccgaagcctgtgtgggtgagaaagttgcagagacaagggtcctttgtctctgc 389
Query: 241 agtgtttcaagatgttccctccctacatcctgggccctgggagcctatacccattcttca 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 agtgcaccaagatgttccctccctacatcctgggccctgggagcctatacccattcttca 329
Query: 301 gatggggaaactaaggaagtttctcaagttccaaagccggtgatggttgagactgaaact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gatggggaaactaaggaagtttctcaagttccaaagccggtgatggttgagactgaaact 269
Query: 361 tcaggaaaccttgtccagagctctaggtaccaaacgtattctgtcttatggtttcatggg 420
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 268 tcaggaaaccttgtccagagctctaggtaccaaacgtattctgtcttatggtgtcatggg 209
Query: 421 gacactgt 428
||||||||
Sbjct: 208 gacactgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
