Query= MSMg01no370_b21.b1 MSMg01no370_b21.b1 CHROMAT_FILE:
MSMg01no370_b21.b1 PHD_FILE: MSMg01no370_b21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:03 2005
(411 letters)
>mm_chr4_83913120_83913930
Length = 811
Score = 789 bits (408), Expect = 0.0
Identities = 408/408 (100%)
Strand = Plus / Plus
Query: 4 ggaattccatattctctcagccaagtgaggaacctcaccacaacccacagacccaagtcc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccatattctctcagccaagtgaggaacctcaccacaacccacagacccaagtcc 263
Query: 64 tgcctggtttctctatcttccttgtcccactgacccacagtgaactcatccacagctctt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgcctggtttctctatcttccttgtcccactgacccacagtgaactcatccacagctctt 323
Query: 124 gagactggcactggtgggatgagggaagtttcctcttgagacaggagaaccaaagtttgc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gagactggcactggtgggatgagggaagtttcctcttgagacaggagaaccaaagtttgc 383
Query: 184 acaggaaagtgagtgtactgtatacaaggaatcctagtcctatcttgttaatacatacta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acaggaaagtgagtgtactgtatacaaggaatcctagtcctatcttgttaatacatacta 443
Query: 244 ctagaacatctcatttgcttaattcgtgttatgtaaacctgggcagggtagaacacacac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctagaacatctcatttgcttaattcgtgttatgtaaacctgggcagggtagaacacacac 503
Query: 304 acatatccaaagtgatcaaaaccaggccaagggagggagtgttctacccacttgccctag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 acatatccaaagtgatcaaaaccaggccaagggagggagtgttctacccacttgccctag 563
Query: 364 gaaagatttatttgtttttttggaggggagtgggtaacaggagggcaa 411
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gaaagatttatttgtttttttggaggggagtgggtaacaggagggcaa 611
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_b21.g1 MSMg01no370_b21.g1 CHROMAT_FILE:
MSMg01no370_b21.g1 PHD_FILE: MSMg01no370_b21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:03 2005
(333 letters)
>mm_chr4_84082001_84082732
Length = 732
Score = 613 bits (317), Expect = e-180
Identities = 329/333 (98%), Gaps = 1/333 (0%)
Strand = Plus / Minus
Query: 1 aaatactattttgaatagggagaaaaggggcagccttgtctagtccctgattttagtggg 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 617 aaatactattttgaatagggagaaagggggcagccttgtctagtccctgattttagtggg 558
Query: 61 attgcttccagctttaggatgtgttcctggcaccaaagaaacagttcccaaatctctctt 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 557 attgcttccagctttaggatgtgttcctggcaccaaagaaacagctcccaaatctctctt 498
Query: 121 gagaaggagataagaactgtaaattgagggactggagagatgcaccctcacatatacatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gagaaggagataagaactgtaaattgagggactggagagatgcaccctcacatatacatg 438
Query: 181 cacacaggcaaaacagcaatttacataaaataaaataaattattggaaaaaaaagaattg 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 437 cacacaggcaaaacagcaatttacataaaataaaataaattattgg-aaaaaaagaattg 379
Query: 241 taggtttggagggtgtgatattcaagaaagccaaataaattatgtaagcaaagcaagacc 300
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 378 taggtttggagggtgtgatatttaagaaagccaaataaattatgtaagcaaagcaagacc 319
Query: 301 cgagcttgccttcattatgtaaatattactgta 333
|||||||||||||||||||||||||||||||||
Sbjct: 318 cgagcttgccttcattatgtaaatattactgta 286
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 732
Length adjustment: 9
Effective length of query: 324
Effective length of database: 723
Effective search space: 234252
Effective search space used: 234252
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
